DelPhi web server v2: incorporating atomic-style geometrical figures into the computational protocol. - Nicholas Smith; Shawn Witham; Subhra Sarkar; Jie Zhang 035; Lin Li 003; Chuan Li 003; Emil Alexov (Bioinform., 2012)

Research and applications: A rational free energy-based approach to understanding and targeting disease-causing missense mutations. - Zhe Zhang; Shawn Witham; Marharita Petukh; Gautier Moroy; Maria A. Miteva; Yoshihiko Ikeguchi; Emil Alexov (J. Am. Medical Informatics Assoc., 2013)

ProBLM Web Server: Protein and Membrane Placement and Orientation Package. - Taylor Kimmet; Nicholas Smith; Shawn Witham; Marharyta Petukh; Subhra Sarkar; Emil Alexov (Comput. Math. Methods Medicine, 2014)