Semiglobal simplex optimization and its application to determining the preferred solvation sites of proteins. - Sheldon Dennis; Sandor Vajda (J. Comput. Chem., 2002)

Improved mapping of protein binding sites. - Tamas Kortvelyesi; Michael Silberstein; Sheldon Dennis; Sandor Vajda (J. Comput. Aided Mol. Des., 2003)

Solvated Interaction Energy (SIE) for Scoring Protein-Ligand Binding Affinities, 1. Exploring the Parameter Space. - Marwen Naïm; Sathesh Bhat; Kathryn N. Rankin; Sheldon Dennis; Shafinaz F. Chowdhury; Imran Siddiqi; Piotr Drabik; Traian Sulea; Christopher I. Bayly; Araz Jakalian; Enrico O. Purisima (J. Chem. Inf. Model., 2007)