TargetFinder: a software for antisense oligonucleotide target site selection based on MAST and secondary structures of target mRNA. - Xiaochen Bo; Shengqi Wang (Bioinform., 2005)

Selection of antisense oligonucleotides based on multiple predicted target mRNA structures. - Xiaochen Bo; Shaoke Lou; Daochun Sun; Wenjie Shu; Jing Yang; Shengqi Wang (BMC Bioinform., 2006)

RDMAS: a web server for RNA deleterious mutation analysis. - Wenjie Shu; Xiaochen Bo; Rujia Liu; Dongsheng Zhao; Zhiqiang Zheng 005; Shengqi Wang (BMC Bioinform., 2006)

AOBase: a database for antisense oligonucleotides selection and design. - Xiaochen Bo; Shaoke Lou; Daochun Sun; Jing Yang; Shengqi Wang (Nucleic Acids Res., 2006)

RSRE: RNA structural robustness evaluator. - Wenjie Shu; Xiaochen Bo; Zhiqiang Zheng 005; Shengqi Wang (Nucleic Acids Res., 2007)

A novel representation of RNA secondary structure based on element-contact graphs. - Wenjie Shu; Xiaochen Bo; Zhiqiang Zheng 005; Shengqi Wang (BMC Bioinform., 2008)

Towards a Comprehensive HBV-Human Interaction Map. - Fei Li 004; Yuxing Peng 001; Wenjian Xu; Guangchuang Yu; Peng Li; Xiaochen Bo; Shengqi Wang (IJCBS, 2009)

EvoRSR: an integrated system for exploring evolution of RNA structural robustness. - Wenjie Shu; Ming Ni; Xiaochen Bo; Zhiqiang Zheng 005; Shengqi Wang (BMC Bioinform., 2009)

PerturbationAnalyzer: a tool for investigating the effects of concentration perturbation on protein interaction networks. - Fei Li 004; Peng Li; Wenjian Xu; Yuxing Peng 001; Xiaochen Bo; Shengqi Wang (Bioinform., 2010)

GOSemSim: an R package for measuring semantic similarity among GO terms and gene products. - Guangchuang Yu; Fei Li 004; Yide Qin; Xiaochen Bo; Yibo Wu; Shengqi Wang (Bioinform., 2010)

Topology aware functional similarity of protein interaction networks based on gene ontology. - Fei Li 004; Xiuliang Cui; Dafei Xie; Xiaochen Bo; Shengqi Wang (EMBC, 2011)

Characterization the regulation of herpesvirus miRNAs from the view of human protein interaction network. - Zhenpeng Li; Fei Li 004; Ming Ni; Peng Li; Xiaochen Bo; Shengqi Wang (BMC Syst. Biol., 2011)

Exploring the role of human miRNAs in virus-host interactions using systematic overlap analysis. - Zhenpeng Li; Xiuliang Cui; Fei Li 004; Peng Li; Ming Ni; Shengqi Wang; Xiaochen Bo (Bioinform., 2013)

ExpTreeDB: Web-based query and visualization of manually annotated gene expression profiling experiments of human and mouse from GEO. - Ming Ni; Fuqiang Ye; Juanjuan Zhu; Zongwei Li; Shuai Yang; Bite Yang; Lu Han; Yongge Wu; Ying Chen; Fei Li 004; Shengqi Wang; Xiaochen Bo (Bioinform., 2014)

EHFPI: a database and analysis resource of essential host factors for pathogenic infection. - Yang Liu 273; Dafei Xie; Lu Han; Hui Bai; Fei Li 004; Shengqi Wang; Xiaochen Bo (Nucleic Acids Res., 2015)

MPR-Net: Multi-Scale Key Points Regression for Lane Detection. - Dantong Zhu; Yuhao Huang; Shengqi Wang; Shitao Chen; Zhixiong Nan; Nanning Zheng 001 (IV, 2021)

Human Resource Allocation Based on Fuzzy Data Mining Algorithm. - You Wu; Zheng Wang; Shengqi Wang (Complex., 2021)

Auction-Based VM Allocation for Deadline-Sensitive Tasks in Distributed Edge Cloud. - Guoju Gao; Mingjun Xiao; Jie Wu 001; He Huang 001; Shengqi Wang; Guo-Liang Chen 001 (IEEE Trans. Serv. Comput., 2021)

3D-MBNet: Intention Based Multimodal Vehicle Trajectory Prediction with 3D Social Convolution. - Shengqi Wang; Yuhao Huang; Miao Kang; Badong Chen; Nanning Zheng 001 (ITSC, 2022)

PLA-MoRe: A Protein-Ligand Binding Affinity Prediction Model via Comprehensive Molecular Representations. - Qingyu Li; Xiaochang Zhang; Lianlian Wu; Xiaochen Bo; Song He; Shengqi Wang (J. Chem. Inf. Model., 2022)

Design of prime-editing guide RNAs with deep transfer learning. - Feng Liu 054; Shuhong Huang; Jiongsong Hu; Xiaozhou Chen; Ziguo Song; Junguo Dong; Yao Liu; Xingxu Huang; Shengqi Wang; Xiaolong Wang; Wenjie Shu (Nat. Mac. Intell., 2023)

Polar R-CNN: End-to-End Lane Detection with Fewer Anchors. - Shengqi Wang; Junmin Liu; Xiangyong Cao; Zengjie Song; Kai Sun 007 (CoRR, 2024)

Exploring the Knowledge of an Outstanding Protein to Protein Interaction Transformer. - Sen Yang 003; Peng Cheng 012; Yang Liu; Dawei Feng; Shengqi Wang (IEEE ACM Trans. Comput. Biol. Bioinform., 2024)

FFINet: Future Feedback Interaction Network for Motion Forecasting. - Miao Kang; Shengqi Wang; Sanping Zhou; Ke Ye; Jingjing Jiang; Nanning Zheng 001 (IEEE Trans. Intell. Transp. Syst., 2024)

ImViD: Immersive Volumetric Videos for Enhanced VR Engagement. - Zhengxian Yang; Shi Pan; Shengqi Wang; Haoxiang Wang; Li Lin; Guanjun Li; Zhengqi Wen; Borong Lin; Jianhua Tao 001; Tao Yu (CVPR, 2025)