Combining Tags of Various Lengths Benefits Peptide Identification in Bottom-up Proteomics. - Shengzhi Lai; Ning Li; Weichuan Yu (BIBM, 2023)

ECL 3.0: a sensitive peptide identification tool for cross-linking mass spectrometry data analysis. - Chen Zhou 004; Shuaijian Dai; Shengzhi Lai; Yuanqiao Lin; Xuechen Zhang 002; Ning Li; Weichuan Yu (BMC Bioinform., 2023)

A Mixed Integer Linear Program for Post-translational Modification Characterization. - Shengzhi Lai; Peize Zhao; Ning Li; Weichuan Yu (BIBM, 2024)