Extended local similarity analysis (eLSA) of microbial community and other time series data with replicates. - Li C. Xia; Joshua A. Steele; Jacob A. Cram; Zoe G. Cardon; Sheri L. Simmons; Joseph J. Vallino; Jed A. Fuhrman; Fengzhu Sun (BMC Syst. Biol., 2011)

A Semi-Quantitative, Synteny-Based Method to Improve Functional Predictions for Hypothetical and Poorly Annotated Bacterial and Archaeal Genes. - Alexis P. Yelton; Brian C. Thomas; Sheri L. Simmons; Paul Wilmes; Adam T. Zemla; Michael P. Thelen; Nicholas Justice; Jillian F. Banfield (PLoS Comput. Biol., 2011)