The extended quadratic residue code is the only (48, 24, 12) self-dual doubly-even code. - Sheridan K. Houghten; Clement W. H. Lam; Larry H. Thiel; J. A. Parker (IEEE Trans. Inf. Theory, 2003)

A Novel Variation Operator for More Rapid Evolution of DNA Error Correcting Codes. - Daniel A. Ashlock; Sheridan K. Houghten (CIBCB, 2005)

Edit metric decoding: a new hope. - Joseph A. Brown; Sheridan K. Houghten; Daniel A. Ashlock (C3S2E, 2009)

DNA error correcting codes: No crossover. - Daniel A. Ashlock; Sheridan K. Houghten (CIBCB, 2009)

Genetic algorithm cryptanalysis of a substitution permutation network. - Joseph A. Brown; Sheridan K. Houghten; Beatrice M. Ombuki-Berman (CICS, 2009)

Ring optimization of edit metric codes in DNA. - Daniel A. Ashlock; Sheridan K. Houghten (BCB, 2010)

Side effect machines for quaternary edit metric decoding. - Joseph A. Brown; Sheridan K. Houghten; Daniel A. Ashlock (CIBCB, 2010)

Autogeneration of fractal photographic mosaic images. - Joseph A. Brown; Daniel A. Ashlock; John Orth; Sheridan K. Houghten (IEEE Congress on Evolutionary Computation, 2011)

Optimizing the Salmon Algorithm for the construction of DNA error-correcting codes. - John Orth; Sheridan K. Houghten (CIBCB, 2011)

Genetic algorithm with alternating selection pressure for protein side-chain packing and pK(a) prediction. - Pascal Comte; Sergei Vassiliev; Sheridan K. Houghten; Doug Bruce (Biosyst., 2011)

Searching for Optimal Deletion Correcting Codes: New Properties and Extensions of Tenengolts Codes. - Zhiyuan Li; Sheridan K. Houghten (CIT, 2012)

A multi-objective genetic algorithm with side effect machines for motif discovery. - Farhad Alizadeh Noori; Sheridan K. Houghten (CIBCB, 2012)

Evolutionary approaches to the generation of optimal error correcting codes. - Daniel E. McCarney; Sheridan K. Houghten; Brian J. Ross (GECCO, 2012)

On the synthesis of DNA error correcting codes. - Daniel A. Ashlock; Sheridan K. Houghten; Joseph Alexander Brown; John Orth (Biosyst., 2012)

Edit metric decoding: Representation strikes back. - James Alexander Hughes; Joseph A. Brown; Sheridan K. Houghten; Daniel A. Ashlock (IEEE Congress on Evolutionary Computation, 2013)

Recentering, reanchoring & restarting an evolutionary algorithm. - James Alexander Hughes; Sheridan K. Houghten; Daniel A. Ashlock (NaBIC, 2013)

Benchmark datasets for the DNA fragment assembly problem. - Guillermo M. Mallén-Fullerton; James Alexander Hughes; Sheridan K. Houghten; Guillermo Fernández-Anaya (Int. J. Bio Inspired Comput., 2013)

Effect of Multi-K Contig Merging in de novo DNA Assembly. - Mohammad Goodarzi; Sheridan K. Houghten; Ping Liang (BIBE, 2014)

Disease-Gene Association Using a Genetic Algorithm. - Koosha Tahmasebipour; Sheridan K. Houghten (BIBE, 2014)

Recentering and Restarting Genetic Algorithm variations for DNA Fragment Assembly. - James Alexander Hughes; Sheridan K. Houghten; Guillermo M. Mallén-Fullerton; Daniel A. Ashlock (CIBCB, 2014)

Modeling metal protein complexes from experimental extended X-ray absorption fine structure using evolutionary algorithms. - Collin Price; Sheridan K. Houghten; Sergei Vassiliev; Doug Bruce (CIBCB, 2014)

Recentering and restarting a genetic algorithm using a generative representation for an ordered gene problem. - James Alexander Hughes; Sheridan K. Houghten; Daniel A. Ashlock (Int. J. Hybrid Intell. Syst., 2014)

Lexicode crossover for embeddable biomarkers. - Daniel A. Ashlock; Sheridan K. Houghten (CIBCB, 2015)

Evolutionary computation for disease gene association. - Ashkan Entezari Heravi; Koosha Tahmasebipour; Sheridan K. Houghten (CIBCB, 2015)

A methodology for disease gene association using centrality measures. - Ashkan Entezari Heravi; Sheridan K. Houghten (CEC, 2016)

Evolving graph compression using similarity measures for bioinformatics applications. - Joseph Alexander Brown; Sheridan K. Houghten; Tyler Kennedy Collins; Qiang Qu (CIBCB, 2016)

Restarting and recentering genetic algorithm variations for DNA fragment assembly: The necessity of a multi-strategy approach. - James Alexander Hughes; Sheridan K. Houghten; Daniel A. Ashlock (Biosyst., 2016)

Genetic programming for improved cryptanalysis of elliptic curve cryptosystems. - Tim Ribaric; Sheridan K. Houghten (CEC, 2017)

Hybridization and ring optimization for larger sets of embeddable biomarkers. - Daniel A. Ashlock; Sheridan K. Houghten (CIBCB, 2017)

Single-objective and multi-objective genetic algorithms for compression of biological networks. - Tyler Kennedy Collins; Adel Zakirov; Joseph Alexander Brown; Sheridan K. Houghten (CIBCB, 2017)

Evaluation of the salmon algorithm. - John Orth; Sheridan K. Houghten; Lindsey Tulloch (CIBCB, 2017)

Build a Sporadic Group in Your Basement. - Paul E. Becker; Martin Derka; Sheridan K. Houghten; Jennifer Ulrich (Am. Math. Mon., 2017)

Parameter selection for modeling of epidemic networks. - Michael Dubé; Sheridan K. Houghten; Daniel A. Ashlock (CIBCB, 2018)

Edit metric decoding: Return of the side effect machines. - Sheridan K. Houghten; Tyler Kennedy Collins; James Alexander Hughes; Joseph Alexander Brown (CIBCB, 2018)

A deep learning pipeline to classify different stages of Alzheimer's disease from fMRI data. - Yosra Kazemi; Sheridan K. Houghten (CIBCB, 2018)

Hierarchical clustering and tree stability. - Amanda Saunders; Daniel A. Ashlock; Sheridan K. Houghten (CIBCB, 2018)

Deep Learning for the Prediction of Stock Market Trends. - Arvand Fazeli; Sheridan K. Houghten (IEEE BigData, 2019)

Representation for Evolution of Epidemic Models. - Michael Dubé; Sheridan K. Houghten; Daniel A. Ashlock (CEC, 2019)

Pandemic: A Graph Evolution Story. - Michael Dubé; Sheridan K. Houghten; Daniel A. Ashlock (CIBCB, 2019)

Compression of Biological Networks using a Genetic Algorithm with Localized Merge. - Sheridan K. Houghten; Angelo Romualdo; Tyler Kennedy Collins; Joseph Alexander Brown (CIBCB, 2019)

Descriptive Symbolic Models of Gaits from Parkinson's Disease Patients. - James Alexander Hughes; Sheridan K. Houghten; Joseph Alexander Brown (CIBCB, 2019)

Evolutionary Graph Compression and Diffusion Methods for City Discovery in Role Playing Games. - Joseph Alexander Brown; Daniel A. Ashlock; Sheridan K. Houghten; Angelo Romualdo (CEC, 2020)

Modelling of Vaccination Strategies for Epidemics using Evolutionary Computation. - Michael Dubé; Sheridan K. Houghten; Daniel A. Ashlock (CEC, 2020)

Gait Model Analysis of Parkinson's Disease Patients under Cognitive Load. - James Alexander Hughes; Sheridan K. Houghten; Joseph Alexander Brown (CEC, 2020)

Cryptanalysis of RSA: Integer Prime Factorization Using Genetic Algorithms. - Emilia Rutkowski; Sheridan K. Houghten (CEC, 2020)

Effective Side Effect Machines for Decoding. - Sharnendu Banik; Sheridan K. Houghten (CIBCB, 2020)

Evolving the Curve. - Michael Dubé; Sheridan K. Houghten; Daniel A. Ashlock; James Alexander Hughes (CIBCB, 2020)

Vaccinating a Population is a Programming Problem. - James Alexander Hughes; Michael Dubé; Sheridan K. Houghten; Daniel A. Ashlock (CIBCB, 2020)

Using Genetic Programming to Investigate a Novel Model of Resting Energy Expenditure for Bariatric Surgery Patients. - James Alexander Hughes; Ryan E. R. Reid; Sheridan K. Houghten; Ross E. Andersen (CIBCB, 2020)

Extracting Information from Weighted Contact Networks via Genetic Algorithms. - Emilia Rutkowski; Sheridan K. Houghten; Joseph Alexander Brown (CIBCB, 2020)

We Are Not Pontius Pilate: Acknowledging Ethics and Policy. - James Alexander Hughes; William Hannah; Peter Kikkert; Barry MacKenzie; Wendy Ashlock; Sheridan K. Houghten; Daniel A. Ashlock; Matthew Stoodley; Michael Dubé; Rachel Brown; Amanda Saunders (SSCI, 2020)

A centrality based multi-objective approach to disease gene association. - Tyler Kennedy Collins; Sheridan K. Houghten (Biosyst., 2020)

Models of Parkinson's Disease Patient Gait. - James Alexander Hughes; Sheridan K. Houghten; Joseph Alexander Brown (IEEE J. Biomed. Health Informatics, 2020)

Weighting on the World to Change... an Epidemic. - Rodrigo Vega Jimenez; Michael Dubé; Sheridan K. Houghten; James Alexander Hughes (CEC, 2021)

Evaluation of Communities from Exploratory Evolutionary Compression of Weighted Graphs. - Emilia Rutkowski; James Sargant; Sheridan K. Houghten; Joseph Alexander Brown (CEC, 2021)

Vaccinating a Population is a Changing Programming Problem. - Sumaiya Amin; Sheridan K. Houghten; James Alexander Hughes (CIBCB, 2021)

One Moose, Two Moose, Three Fields, More? - Daniel A. Ashlock; Joseph Alexander Brown; Sheridan K. Houghten; Munir Makhmutov (CIBCB, 2021)

Identification of Genes Associated with Alzheimer's Disease using Evolutionary Computation. - Guangyao Chen; James Sargant; Sheridan K. Houghten; Tyler Kennedy Collins (CIBCB, 2021)

Lossy Compression of Quality Values in Sequencing Data. - Veronica Suaste Morales; Sheridan K. Houghten (IEEE ACM Trans. Comput. Biol. Bioinform., 2021)

Now I Know My Alpha, Beta, Gammas: Variants in an Epidemic Scheme. - Michael Dubé; Sheridan K. Houghten (CEC, 2022)

Evolving Weighted Contact Networks for Epidemic Modeling: the Ring and the Power. - James Sargant; Sheridan K. Houghten; Michael Dubé (CEC, 2022)

Classification of Parkinson's Disease Patients and Effectiveness of Medication for Freezing of Gait. - Omid Mohamad Beigi; Lígia Reis Nóbrega; Sheridan K. Houghten; Adriano de Oliveira Andrade; Adriano Alves Pereira (CIBCB, 2022)

Evaluation of Frameworks for Epidemic Variants and Infectivity using an Evolutionary Algorithm. - Michael Dubé; Sheridan K. Houghten (CIBCB, 2022)

Evolving Lockdown Strategies to Minimize Infections in an Epidemic. - James Sargant; Michael Dubé; Sheridan K. Houghten (CIBCB, 2022)

Effective decoders for DNA codes. - Sheridan K. Houghten; Sharnendu Banik (Biosyst., 2022)

Comparison of Representations to Evolve Weighted Contact Networks with Epidemic Properties. - Michael Dubé; James Sargant; Sheridan K. Houghten (CIBCB, 2023)

From Bits to Bases: Evolving a Versatile Construct for Biological Sequence and Network Data. - Michael Dubé; James Sargant; Sheridan K. Houghten; Steffen Graether (CIBCB, 2023)

What Drives Evolution of Self-Driving Automata? - Michael Dubé; Kevin Olenic; Sheridan K. Houghten (SSCI, 2023)

Conference Report on 2022 IEEE Conference on Computational Intelligence in Bioinformatics and Computational Biology (IEEE CIBCB 2022) [Conference Report]. - Sheridan K. Houghten; Gary B. Fogel (IEEE Comput. Intell. Mag., 2023)

All lockdowns are not equal: Reducing epidemic impact through evolutionary computation. - James Sargant; Michael Dubé; Sheridan K. Houghten (Biosyst., 2023)

A multi-objective genetic algorithm for compression of weighted graphs to simplify epidemic analysis. - Emilia Rutkowski; Sheridan K. Houghten; Joseph Alexander Brown (Appl. Soft Comput., 2023)

Freezing of gait in Parkinson's disease: Classification using computational intelligence. - Omid Mohamad Beigi; Lígia Reis Nóbrega; Sheridan K. Houghten; Adriano Alves Pereira; Adriano de Oliveira Andrade (Biosyst., 2023)

Promoting Diversity in the Evolution of Biological Sequence Data. - Michael Dubé; Sheridan K. Houghten; Steffen P. Graether (CEC, 2024)

Driving Evolution Towards Discovery of Patterns in Sets of Weakly-Conserved DNA Sequences. - Michael Dubé; Sheridan K. Houghten; Steffen P. Graether (CIBCB, 2024)

Generating Models of Human Gait in Patients with Parkinson's Disease using Genetic Programming. - Tristan Navikevicius; Lígia Reis Nóbrega; Sheridan K. Houghten; Adriano de Oliveira Andrade; Adriano Alves Pereira (CIBCB, 2024)

Immunity Vanishing Act: Epidemic Variant and Immunity Analysis via Evolutionary Computation. - Farhana Yasmeen; Michael Dubé; Sheridan K. Houghten (CIBCB, 2024)

2022 IEEE conference on computational intelligence in bioinformatics and computational biology (IEEE CIBCB, 2022). - Joseph Alexander Brown; Sheridan K. Houghten; Gary B. Fogel (Biosyst., 2024)