Thresholds for Object-Oriented Measures. - Saïda Benlarbi; Khaled El Emam; Nishith Goel; Shesh N. Rai (ISSRE, 2000)

Comparing case-based reasoning classifiers for predicting high risk software components. - Khaled El Emam; Saïda Benlarbi; Nishith Goel; Shesh N. Rai (J. Syst. Softw., 2001)

The Confounding Effect of Class Size on the Validity of Object-Oriented Metrics. - Khaled El Emam; Saïda Benlarbi; Nishith Goel; Shesh N. Rai (IEEE Trans. Software Eng., 2001)

The Optimal Class Size for Object-Oriented Software. - Khaled El Emam; Saïda Benlarbi; Nishith Goel; Walcélio L. Melo; Hakim Lounis; Shesh N. Rai (IEEE Trans. Software Eng., 2002)

Robust detection method for differential expression studies. - Shesh N. Rai; Stanley Pounds (BMC Bioinform., 2008)

Assumption adequacy averaging as a concept for developing more robust methods for differential gene expression analysis. - Stanley Pounds; Shesh N. Rai (Comput. Stat. Data Anal., 2009)

Confidence Intervals for Survival Probabilities: A Comparison Study. - Xiaobin Yuan; Shesh N. Rai (Commun. Stat. Simul. Comput., 2011)

Classification of clinical outcomes using high-throughput informatics: Part 1 - nonparametric method reviews. - Alexander C. Cambon; Kathy B. Baumgartner; Guy N. Brock; Nigel G. F. Cooper; Dongfeng Wu; Shesh N. Rai (Model. Assist. Stat. Appl., 2015)

Classification of clinical outcomes using high-throughput informatics: Part 2 - parametric method reviews. - Alexander C. Cambon; Kathy B. Baumgartner; Guy N. Brock; Nigel G. F. Cooper; Dongfeng Wu; Shesh N. Rai (Model. Assist. Stat. Appl., 2015)

Metabolomics data analysis and missing value issues with application to infarcted mouse hearts. - Jasmit S. Shah; Guy N. Brock; Shesh N. Rai (BMC Bioinform., 2015)

An efficient algorithm for protein structure comparison using elastic shape analysis. - Sudhir Srivastava; Shashi Bhushan Lal; Dwijesh Chandra Mishra; Ulavappa B. Angadi; K. K. Chaturvedi; Shesh N. Rai; Anil Rai (Algorithms Mol. Biol., 2016)

Distribution based nearest neighbor imputation for truncated high dimensional data with applications to pre-clinical and clinical metabolomics studies. - Jasmit S. Shah; Shesh N. Rai; Andrew P. DeFilippis; Bradford G. Hill; Aruni Bhatnagar; Guy N. Brock (BMC Bioinform., 2017)

Properties of adaptive clinical trial signature design in the presence of gene and gene-treatment interaction. - Alexander C. Cambon; Kathy B. Baumgartner; Guy N. Brock; Nigel G. F. Cooper; Dongfeng Wu; Shesh N. Rai (Commun. Stat. Simul. Comput., 2017)

Proceedings of the 16th Annual UT-KBRIN Bioinformatics Summit 2016: bioinformatics: Burns, TN, USA. April 21-23, 2017. - Eric C. Rouchka; Julia H. Chariker; David Tieri; Juw Won Park; Shreedharkumar D. Rajurkar; Vikas Singh; Nishchal K. Verma; Yan Cui 001; Mark L. Farman; Bradford Condon; Neil Moore; Jerzy W. Jaromczyk; et al. (BMC Bioinform., 2017)

Fifteen Years of Gene Set Analysis for High-Throughput Genomic Data: A Review of Statistical Approaches and Future Challenges. - Samarendra Das; Craig J. McClain; Shesh N. Rai (Entropy, 2020)

Statistical Approach for Biologically Relevant Gene Selection from High-Throughput Gene Expression Data. - Samarendra Das; Shesh N. Rai (Entropy, 2020)

Statistical Approach of Gene Set Analysis with Quantitative Trait Loci for Crop Gene Expression Studies. - Samarendra Das; Shesh N. Rai (Entropy, 2021)

Differential Expression Analysis of Single-Cell RNA-Seq Data: Current Statistical Approaches and Outstanding Challenges. - Samarendra Das; Anil Rai; Shesh N. Rai (Entropy, 2022)