Glimma: interactive graphics for gene expression analysis. - Shian Su; Charity W. Law; Casey Ah-Cann; Marie-Liesse Asselin-Labat; Marnie E. Blewitt; Matthew E. Ritchie (Bioinform., 2017)

scPipe: A flexible R/Bioconductor preprocessing pipeline for single-cell RNA-sequencing data. - Luyi Tian; Shian Su; Xueyi Dong; Daniela Amann-Zalcenstein; Christine Biben; Azadeh Seidi; Douglas J. Hilton; Shalin H. Naik; Matthew E. Ritchie (PLoS Comput. Biol., 2018)

BiocPkgTools: Toolkit for mining the Bioconductor package ecosystem. - Shian Su; Vincent J. Carey; Lori A. Shepherd; Matthew E. Ritchie; Martin T. Morgan; Sean Davis 001 (F1000Research, 2019)

CellBench: R/Bioconductor software for comparing single-cell RNA-seq analysis methods. - Shian Su; Luyi Tian; Xueyi Dong; Peter F. Hickey; Saskia Freytag; Matthew E. Ritchie (Bioinform., 2020)

NanoMethViz: An R/Bioconductor package for visualizing long-read methylation data. - Shian Su; Quentin Gouil; Marnie E. Blewitt; Dianne Cook; Peter F. Hickey; Matthew E. Ritchie (PLoS Comput. Biol., 2021)

Computational tools for long-read DNA methylation analysis and benchmarking complex single-cell genomics pipelines. - Shian Su (2023)

Sweat-Powered, mm-Scale, Continuous-Time Sensor Systems With Bluetooth Low Energy (BLE) Backscatter. - Jordan S. Besnoff; Hongtao Zhong; Shian Su; Rajaram Kaveti; Nitin Maiya; Supriya Krishna; Nate T. Garland; Amay J. Bandodkar; David S. Ricketts (IEEE Access, 2024)