Application of RotaSVM for HLA Class II Protein-Peptide Interaction Prediction. - Shib Sankar Bhowmick; Indrajit Saha; Giovanni Mazzocco; Ujjwal Maulik; Luís Rato; Debotosh Bhattacharjee; Dariusz Plewczynski (BIOINFORMATICS, 2014)

MaER: A New Ensemble Based Multiclass Classifier for Binding Activity Prediction of HLA Class II Proteins. - Giovanni Mazzocco; Shib Sankar Bhowmick; Indrajit Saha; Ujjwal Maulik; Debotosh Bhattacharjee; Dariusz Plewczynski (PReMI, 2015)

Analysis of Next-Generation Sequencing Data of miRNA for the Prediction of Breast Cancer. - Indrajit Saha; Shib Sankar Bhowmick; Filippo Geraci; Marco Pellegrini 001; Debotosh Bhattacharjee; Ujjwal Maulik; Dariusz Plewczynski (SEMCCO, 2015)

Binding Activity Prediction of Cyclin-Dependent Inhibitors. - Indrajit Saha; Benedykt Rak; Shib Sankar Bhowmick; Ujjwal Maulik; Debotosh Bhattacharjee; Uwe Koch; Michal Lazniewski; Dariusz Plewczynski (J. Chem. Inf. Model., 2015)

A new evolutionary microRNA marker selection using next-generation sequencing data. - Adrian Lancucki; Indrajit Saha; Shib Sankar Bhowmick; Ujjwal Maulik; Piotr Lipinski (CEC, 2016)

Biomarker identification using next generation sequencing data of RNA. - Shib Sankar Bhowmick; Indrajit Saha; Ujjwal Maulik; Debotosh Bhattacharjee (ICACCI, 2016)

Identification of miRNA signature using Next-Generation Sequencing data of prostate cancer. - Shib Sankar Bhowmick; Indrajit Saha; Ujjwal Maulik; Debotosh Bhattacharjee (RAIT, 2016)

Integrated Classifier: A Tool for Microarray Analysis. - Shib Sankar Bhowmick; Indrajit Saha; Luís Rato; Debotosh Bhattacharjee (CICBA (2), 2017)

Integrated analysis of the miRNA-mRNA next-generation sequencing data for finding their associations in different cancer types. - Shib Sankar Bhowmick; Debotosh Bhattacharjee; Luís Rato (Comput. Biol. Chem., 2020)

miRNA and mRNA Expression Analysis of Human Breast Cancer Subtypes to Identify New Markers. - Shib Sankar Bhowmick; Debotosh Bhattacharjee (CICBA, 2022)