The APEX Quantitative Proteomics Tool: Generating protein quantitation estimates from LC-MS/MS proteomics results. - John C. Braisted; Srilatha Kuntumalla; Christine Vogel; Edward M. Marcotte; Alan R. Rodrigues; Rong Wang; Shih-Ting Huang; Erik S. Ferlanti; Alexander I. Saeed; Robert D. Fleischmann; Scott N. Peterson; Rembert Pieper (BMC Bioinform., 2008)

The UI issues for the search engine. - Shih-Ting Huang; Tsai-Hsuan Tsai; Hsien-Tsung Chang (CAD/Graphics, 2009)

Using Sublexical Translations to Handle the OOV Problem in MT. - Chung-Chi Huang; Ho-Ching Yen; Shih-Ting Huang; Jason S. Chang (AMTA, 2010)

GRASP: Grammar- and Syntax-based Pattern-Finder for Collocation and Phrase Learning. - Mei-hua Chen; Chung-Chi Huang; Shih-Ting Huang; Jason S. Chang (PACLIC, 2010)

New orientation-based elimination approach for accurate line-detection. - Kuo-Liang Chung; Zeng-Wei Lin; Shih-Ting Huang; Yong-Huai Huang; Hong-Yuan Mark Liao (Pattern Recognit. Lett., 2010)

EdIt: A Broad-Coverage Grammar Checker Using Pattern Grammar. - Chung-Chi Huang; Mei-hua Chen; Shih-Ting Huang; Jason S. Chang (ACL (System Demonstrations), 2011)

GRASP: Grammar- and Syntax-based Pattern-Finder in CALL. - Chung-Chi Huang; Mei-hua Chen; Shih-Ting Huang; Hsien-Chin Liou; Jason S. Chang (BEA@ACL, 2011)

An Investigation into a Personalised and Web2.0-Based Search Engine Interface. - Tsai-Hsuan Tsai; Hsien-Tsung Chang; Shih-Ting Huang (HCI (5), 2011)

[PatentMT] Summary Report of Team III_CYUT_NTHU. - Joseph Z. Chang; Ho-Ching Yen; Shih-Ting Huang; Ming-Zhuan Jiang; Chung-Chi Huang; Jason S. Chang; Ping-Che Yang (NTCIR, 2011)

片語式機器翻譯中未知詞與落單字的問題探討 (Learning to Deal with the OOV Problem in Phrase-based MT System) [In Chinese]. - Ming-Chuan Chiang; Chung-Chi Huang; Ho-Ching Yen; Shih-Ting Huang; Chun-Sheng Chang; Ping-Che Yang; Tsun Ku (ROCLING, 2011)

A Cross-Lingual Pattern Retrieval Framework. - Mei-hua Chen; Chung-Chi Huang; Shih-Ting Huang; Hsien-Chin Liou; Jason S. Chang (Polibits, 2011)

Using Sublexical Translations to Handle the OOV Problem in Machine Translation. - Chung-Chi Huang; Ho-Ching Yen; Ping-Che Yang; Shih-Ting Huang; Jason S. Chang (ACM Trans. Asian Lang. Inf. Process., 2011)

FLOW: A First-Language-Oriented Writing Assistant System. - Mei-hua Chen; Shih-Ting Huang; Hung-ting Hsieh; Ting-hui Kao; Jason S. Chang (ACL (System Demonstrations), 2012)

PREFER: Using a Graph-Based Approach to Generate Paraphrases for Language Learning. - Mei-hua Chen; Shih-Ting Huang; Chung-Chi Huang; Hsien-Chin Liou; Jason S. Chang (BEA@NAACL-HLT, 2012)

Helping Our Own: NTHU NLPLAB System Description. - Jian-Cheng Wu; Joseph Chang; Yi-Chun Chen; Shih-Ting Huang; Mei-hua Chen; Jason S. Chang (BEA@NAACL-HLT, 2012)

Augmentable Paraphrase Extraction Framework. - Mei-hua Chen; Yi-Chun Chen; Shih-Ting Huang; Jason S. Chang (IJCNLP, 2013)

An Automatic Reference Aid for ImprovingEFL Learners' Formulaic Expressionsin Productive Language Use. - Mei-hua Chen; Chung-Chi Huang; Shih-Ting Huang; Jason S. Chang; Hsien-Chin Liou (IEEE Trans. Learn. Technol., 2014)

Identification of item features in microblogging data. - Shih-Ting Huang; Pei-Shu Li; Hung-Yu Kao (TAAI, 2015)

Autonomic Smart Home Operations Management Using CWMP: A Task-Centric View. - Chun-Feng Liao; Shih-Ting Huang; Yi-Ching Wang (IEA/AIE, 2016)

The Effects of Platform Feature, Content Feature, and Service Experience on Music Streaming Service Continuance. - Kai Wang 038; Shih-Ting Huang; Yi-Hsuan Li (MISNC, 2016)

Categorizating 3D Fetal Ultrasound Image Database in First Trimester Pregnancy based on Mid-Sagittal Plane Assessments. - Cheung-Wen Chang; Shih-Ting Huang; Yu-Han Huang; Yung-Nien Sun; Pei-Ying Tsai (AIPR, 2017)

Role of Service Experience and Value Co- Creation in Determining Music Streaming Service Continuance. - Kai Wang 038; Shih-Ting Huang; Chi-Feng Tai (PACIS, 2017)

ADF: An Anomaly Detection Framework for Large-Scale PM2.5 Sensing Systems. - Ling-Jyh Chen; Yao-Hua Ho; Hsin-Hung Hsieh; Shih-Ting Huang; Hu-Cheng Lee; Sachit Mahajan (IEEE Internet Things J., 2018)

Time to Lane Crossing Estimation Using Deep Learning-Based Instance Segmentation Scheme. - Shih-Ting Huang; Yu-Ching Chan; Yu-Chen Lin 002; Chun-Liang Lin (ICAAI, 2019)

Convolution-based Soma Counting Algorithm for Confocal Microscopy Image Stacks. - Shih-Ting Huang; Yue Jiang; Hao-Chiang Shao (BIOSIGNALS, 2021)

Targeted Deep Learning: Framework, Methods, and Applications. - Shih-Ting Huang; Johannes Lederer (CoRR, 2021)

Tuning-free ridge estimators for high-dimensional generalized linear models. - Shih-Ting Huang; Fang Xie; Johannes Lederer (Comput. Stat. Data Anal., 2021)

Drosophila Brain Aligner: Registering 3D Point Clouds in 2D Parameterization Domain. - Hao-Chiang Shao; Lu-Hung Hsu; Yung-Chang Chen; Ying-Chu Huang; Shih-Ting Huang (J. Inf. Sci. Eng., 2022)

DeepMoM: Robust Deep Learning With Median-of-Means. - Shih-Ting Huang; Johannes Lederer (J. Comput. Graph. Stat., 2023)

A Research on the Usability Evaluation of Health Literacy for eHealth Applications. - Shih-Ting Huang; Shih-Chieh Chen (HCI (58), 2025)