Cram-JS: reference-based decompression in node and the browser. - Robert M. Buels; Shihab Dider; Colin M. Diesh; James Robinson; Ian H. Holmes (Bioinform., 2019)

Machine Boss: rapid prototyping of bioinformatic automata. - Jordi Silvestre-Ryan; Yujie Wang; Mehak Sharma; Stephen Lin; Yolanda Shen; Shihab Dider; Ian H. Holmes (Bioinform., 2021)