The Normalized Similarity Metric and Its Applications. - Shihyen Chen; Bin Ma 002; Kaizhong Zhang (BIBM, 2007)

An Improved Algorithm for Tree Edit Distance Incorporating Structural Linearity. - Shihyen Chen; Kaizhong Zhang (COCOON, 2007)

Locality and Gaps in RNA Comparison. - Rolf Backofen; Shihyen Chen; Danny Hermelin; Gad M. Landau; Mikhail A. Roytberg; Oren Weimann; Kaizhong Zhang (J. Comput. Biol., 2007)

On the similarity metric and the distance metric. - Shihyen Chen; Bin Ma 002; Kaizhong Zhang (Theor. Comput. Sci., 2009)

Pattern Matching and Local Alignment for RNA Structures. - Shihyen Chen; Zhuozhi Wang; Kaizhong Zhang (CoRR, 2014)

An improved algorithm for tree edit distance with applications for RNA secondary structure comparison. - Shihyen Chen; Kaizhong Zhang (J. Comb. Optim., 2014)

A Review on the Tree Edit Distance Problem and Related Path-Decomposition Algorithms. - Shihyen Chen (CoRR, 2015)