Search result exploration: a preliminary study of blind and sighted users' decision making and performance. - Melody Y. Ivory; Shiqing Yu; Kathryn Gronemyer (CHI Extended Abstracts, 2004)

Graphical Models for Non-Negative Data Using Generalized Score Matching. - Shiqing Yu; Mathias Drton; Ali Shojaie (AISTATS, 2018)

Generalized Score Matching for Non-Negative Data. - Shiqing Yu; Mathias Drton; Ali Shojaie (J. Mach. Learn. Res., 2019)

CorDiffViz: an R package for visualizing multi-omics differential correlation networks. - Shiqing Yu; Mathias Drton; Daniel E. L. Promislow; Ali Shojaie (BMC Bioinform., 2021)

Directed Graphical Models and Causal Discovery for Zero-Inflated Data. - Shiqing Yu; Mathias Drton; Ali Shojaie (CLeaR, 2023)

Interaction Models and Generalized Score Matching for Compositional Data. - Shiqing Yu; Mathias Drton; Ali Shojaie (LoG, 2023)