Noise Analysis of a SFS Algorithm Formulated under Various Imaging Conditions. - Amal A. Farag; Shireen Y. Elhabian; Abdelrehim H. Ahmed; Aly A. Farag (ISVC (1), 2008)

Face recognition at-a-distance based on sparse-stereo reconstruction. - Ham M. Rara; Shireen Y. Elhabian; Asem M. Ali; Mike Miller; Thomas L. Starr; Aly A. Farag (CVPR Workshops, 2009)

Distant face recognition based on sparse-stereo reconstruction. - Ham M. Rara; Shireen Y. Elhabian; Asem M. Ali; Mike Miller; Thomas L. Starr; Aly A. Farag (ICIP, 2009)

Model-based shape recovery from single images of general and unknown lighting. - Ham M. Rara; Shireen Y. Elhabian; Thomas L. Starr; Aly A. Farag (ICIP, 2009)

A Framework for Long Distance Face Recognition Using Dense - and Sparse-Stereo Reconstruction. - Ham M. Rara; Shireen Y. Elhabian; Asem M. Ali; Travis R. Gault; Mike Miller; Thomas L. Starr; Aly A. Farag (ISVC (1), 2009)

Face recognition at-a-distance using texture and sparse-stereo reconstruction. - Ham M. Rara; Aly A. Farag; Shireen Y. Elhabian; Asem M. Ali; William Miller; Thomas L. Starr; Todd Davis (BTAS, 2010)

3D face recovery from intensities of general and unknown lighting using Partial Least Squares. - Ham M. Rara; Shireen Y. Elhabian; Thomas L. Starr; Aly A. Farag (ICIP, 2010)

Face Recognition at-a-Distance Using Texture, Dense- and Sparse-Stereo Reconstruction. - Ham M. Rara; Asem M. Ali; Shireen Y. Elhabian; Thomas L. Starr; Aly A. Farag (ICPR, 2010)

Feature-Based Lung Nodule Classification. - Amal A. Farag; Asem M. Ali; James H. Graham; Shireen Y. Elhabian; Aly A. Farag; Robert Falk (ISVC (3), 2010)

Surface Modeling of the Corpus Callosum from MRI Scans. - Ahmed A. Farag; Shireen Y. Elhabian; Mostafa Abdelrahman; James H. Graham; Aly A. Farag; Dongqing Chen; Manuel Casanova (ISVC (3), 2010)

Toward Precise Pulmonary Nodule Descriptors for Nodule Type Classification. - Amal A. Farag; Shireen Y. Elhabian; James H. Graham; Aly A. Farag; Robert Falk (MICCAI (3), 2010)

Towards Efficient and Compact Phenomenological Representation of Arbitrary Bidirectional Surface Reflectance. - Shireen Y. Elhabian; Ham M. Rara; Aly A. Farag (BMVC, 2011)

Illumination-invariant Statistical Shape Recovery with Contiguous Occlusion. - Shireen Y. Elhabian; Ham M. Rara; Asem M. Ali; Aly A. Farag (CRV, 2011)

Modeling Lambertian Surfaces Under Unknown Distant Illumination Using Hemispherical Harmonics. - Shireen Y. Elhabian; Ham M. Rara; Aly A. Farag (CRV, 2011)

Towards accurate and efficient representation of image irradiance of convex-Lambertian objects under unknown near lighting. - Shireen Y. Elhabian; Ham M. Rara; Aly A. Farag (ICCV, 2011)

On the use of hemispherical harmonics for modeling images of objects under unknown distant illumination. - Shireen Y. Elhabian; Ham M. Rara; Aly A. Farag (ICIP, 2011)

Solving Geometric Co-registration Problem of Multi-spectral Remote Sensing Imagery Using SIFT-Based Features toward Precise Change Detection. - Mostafa Abdelrahman; Asem M. Ali; Shireen Y. Elhabian; Aly A. Farag (ISVC (2), 2011)

Non-Lambertian Model-based Facial Shape Recovery from Single Image Under Unknown General Illumination. - Shireen Y. Elhabian; Eslam A. Mostafa; Ham M. Rara; Aly A. Farag (CRV, 2012)

A passive stereo system for 3D human face reconstruction and recognition at a distance. - Mostafa Abdelrahman; Asem M. Ali; Shireen Y. Elhabian; Ham M. Rara; Aly A. Farag (CVPR Workshops, 2012)

Fully automated 3D colon segmentation for early detection of colorectal cancer based on convex formulation of the active contour model. - Marwa Ismail; Shireen Y. Elhabian; Aly A. Farag; Gerald W. Dryden; Albert Seow (CVPR Workshops, 2012)

Occlusal surface reconstruction of human teeth from a single image based on object and sensor physical characteristics. - Aly S. Abdelrahim; Aly A. Farag; Shireen Y. Elhabian; Eslam A. Mostafa; Wael Aboelmaaty (ICIP, 2012)

Modeling image irradiance under natural illumination and isotropic surface reflectance. - Shireen Y. Elhabian; Aly A. Farag (ICIP, 2012)

Model-Based Human Teeth Shape Recovery from a Single Optical Image with Unknown Illumination. - Aly A. Farag; Shireen Y. Elhabian; Aly S. Abdelrehim; Wael Aboelmaaty; Allan G. Farman; David Tasman (MCV, 2012)

Analytic Bilinear Appearance Subspace Construction for Modeling Image Irradiance under Natural Illumination and Non-Lambertian Reflectance. - Shireen Y. Elhabian; Aly A. Farag (CVPR, 2013)

A 3D reconstruction of the human jaw from a single image. - Aly S. Abdelrahim; Ahmed Shalaby 001; Shireen Y. Elhabian; James H. Graham; Aly A. Farag (ICIP, 2013)

Clinical crowns shape reconstruction - An image-based approach. - Shireen Y. Elhabian; Aly S. Abdelrahim; Amal A. Farag; David Tasman; Wael Aboelmaaty; Allan G. Farman (ISBI, 2013)

Towards efficient image irradiance modelling of convex Lambertian surfaces under single viewpoint and frontal illumination. - Shireen Y. Elhabian; Aly A. Farag (IET Comput. Vis., 2013)

Statistical morphable model for human teeth restoration. - Eslam A. Mostafa; Shireen Y. Elhabian; Aly S. Abdelrahim; Salwa Elshazly; Aly A. Farag (ICIP, 2014)

A preliminary study on the effect of motion correction on HARDI reconstruction. - Shireen Y. Elhabian; Yaniv Gur; Clement Vachet; Joseph Piven; Martin Styner; Ilana Leppert; G. Bruce Pike; Guido Gerig (ISBI, 2014)

Shape-from-shading using sensor and physical object characteristics applied to human teeth surface reconstruction. - Aly S. Abdelrahim; Aly A. Farag; Shireen Y. Elhabian; Moumen T. El-Melegy (IET Comput. Vis., 2014)

Image irradiance harmonics: a phenomenological model of image irradiance of arbitrary surface reflectance. - Shireen Y. Elhabian; Aly A. Farag (IET Comput. Vis., 2014)

Appearance-based approach for complete human jaw shape reconstruction. - Shireen Y. Elhabian; Aly A. Farag (IET Comput. Vis., 2014)

A Bayesian formulation of graph-cut surface estimation with global shape priors. - Gopalkrishna Veni; Shireen Y. Elhabian; Ross T. Whitaker (ISBI, 2015)

Helmholtz HSH-Based Basis: A Compact Phenomenological Representation of Arbitrary Reflectance. - Shireen Y. Elhabian; Aly A. Farag (Informatica, 2015)

Optimal parameter map estimation for shape representation: A generative approach. - Shireen Y. Elhabian; Praful Agrawal; Ross T. Whitaker (ISBI, 2016)

Compressive sensing based Q-space resampling for handling fast bulk motion in hardi acquisitions. - Shireen Y. Elhabian; Clement Vachet; Joseph Piven; Martin Styner; Guido Gerig (ISBI, 2016)

Towards a Statistical Shape-Aware Deformable Contour Model for Cranial Nerve Identification. - Sharmin Sultana; Praful Agrawal; Shireen Y. Elhabian; Ross T. Whitaker; Tanweer Rashid; Jason E. Blatt; Justin S. Cetas; Michel A. Audette (CLIP@MICCAI, 2016)

Entropy-based correspondence improvement of interpolated skeletal models. - Liyun Tu; Jared Vicory; Shireen Y. Elhabian; Beatriz Paniagua; Juan-Carlos Prieto 001; James N. Damon; Ross T. Whitaker; Martin Styner; Stephen M. Pizer (Comput. Vis. Image Underst., 2016)

ShapeOdds: Variational Bayesian Learning of Generative Shape Models. - Shireen Y. Elhabian; Ross T. Whitaker (CVPR, 2017)

From Label Maps to Generative Shape Models: A Variational Bayesian Learning Approach. - Shireen Y. Elhabian; Ross T. Whitaker (IPMI, 2017)

Learning Deep Features for Automated Placement of Correspondence Points on Ensembles of Complex Shapes. - Praful Agrawal; Ross T. Whitaker; Shireen Y. Elhabian (MICCAI (1), 2017)

ShapeCut: Bayesian surface estimation using shape-driven graph. - Gopalkrishna Veni; Shireen Y. Elhabian; Ross T. Whitaker (Medical Image Anal., 2017)

Deep Learning for End-to-End Atrial Fibrillation Recurrence Estimation. - Riddhish Bhalodia; Anupama Goparaju; Tim Sodergren; Ross T. Whitaker; Alan Morris; Evgueni Kholmovski; Nassir Marrouche; Joshua Cates; Shireen Y. Elhabian (CinC, 2018)

Interactive Exploration of Left Atrium Population-Level Morphology in Atrial Fibrillation Patients. - Tim Sodergren; Anupama Goparaju; Alan Morris; Evgueni Kholmovski; Nassir Marrouche; Joshua Cates; Shireen Y. Elhabian (CinC, 2018)

DeepSSM: A Deep Learning Framework for Statistical Shape Modeling from Raw Images. - Riddhish Bhalodia; Shireen Y. Elhabian; Ladislav Kavan; Ross T. Whitaker (ShapeMI@MICCAI, 2018)

On the Evaluation and Validation of Off-the-Shelf Statistical Shape Modeling Tools: A Clinical Application. - Anupama Goparaju; Ibolya Csecs; Alan Morris; Evgueni Kholmovski; Nassir Marrouche; Ross T. Whitaker; Shireen Y. Elhabian (ShapeMI@MICCAI, 2018)

Mixture Modeling of Global Shape Priors and Autoencoding Local Intensity Priors for Left Atrium Segmentation. - Tim Sodergren; Riddhish Bhalodia; Ross T. Whitaker; Joshua Cates; Nassir Marrouche; Shireen Y. Elhabian (STACOM@MICCAI, 2018)

Clustering With Pairwise Relationships: A Generative Approach. - Yen-Yun Yu; Shireen Y. Elhabian; Ross T. Whitaker (CoRR, 2018)

Skeletal Shape Correspondence Through Entropy. - Liyun Tu; Martin Styner; Jared Vicory; Shireen Y. Elhabian; Rui Wang 071; Jun-Pyo Hong; Beatriz Paniagua; Juan-Carlos Prieto 001; Dan Yang 001; Ross T. Whitaker; Stephen M. Pizer (IEEE Trans. Medical Imaging, 2018)

Does Alignment in Statistical Shape Modeling of Left Atrium Appendage Impact Stroke Prediction? - Riddhish Bhalodia; Archanasri Subramanian; Alan Morris; Joshua Cates; Ross T. Whitaker; Evgueni Kholmovski; Nassir Marrouche; Shireen Y. Elhabian (CinC, 2019)

Interatrial Septum and Appendage Ostium in Atrial Fibrillation Patients: A Population Study. - Anupama Goparaju; Alan Morris; Ibolya Csecs; Riddhish Bhalodia; Tom Ditter; Kristine Fuimaono; Evgueni Kholmovski; Nassir Marrouche; Joshua Cates; Shireen Y. Elhabian (CinC, 2019)

Efficient Segmentation Pipeline Using Diffeomorphic Image Registration: A Validation Study. - Shalin Parikh; Anupama Goparaju; Riddhish Bhalodia; Bosten Loveless; Alan Morris; Joshua Cates; Evgueni Kholmovski; Nassir Marrouche; Shireen Y. Elhabian (CinC, 2019)

A Cooperative Autoencoder for Population-Based Regularization of CNN Image Registration. - Riddhish Bhalodia; Shireen Y. Elhabian; Ladislav Kavan; Ross T. Whitaker (MICCAI (2), 2019)

Medial axis segmentation of cranial nerves using shape statistics-aware discrete deformable models. - Sharmin Sultana; Praful Agrawal; Shireen Y. Elhabian; Ross T. Whitaker; Jason E. Blatt; Benjamin Gilles; Justin S. Cetas; Tanweer Rashid; Michel A. Audette (Int. J. Comput. Assist. Radiol. Surg., 2019)

CoopSubNet: Cooperating Subnetwork for Data-Driven Regularization of Deep Networks under Limited Training Budgets. - Riddhish Bhalodia; Shireen Y. Elhabian; Ladislav Kavan; Ross T. Whitaker (CoRR, 2019)

SetGANs: Enforcing Distributional Accuracy in Generative Adversarial Networks. - Alessandro Ferrero; Shireen Y. Elhabian; Ross T. Whitaker (CoRR, 2019)

Infinite ShapeOdds: Nonparametric Bayesian Models for Shape Representations. - Wei W. Xing; Shireen Y. Elhabian; Robert Michael Kirby; Ross T. Whitaker; Shandian Zhe (AAAI, 2020)

dpVAEs: Fixing Sample Generation for Regularized VAEs. - Riddhish Bhalodia; Iain Lee; Shireen Y. Elhabian (ACCV (4), 2020)

Right Ventricular Shape Distortion in Tricuspid Regurgitation. - Ashley E. Morgan; Atefeh Kashani; Brian Zenger; Lindsay C. Rupp; Maura D. Perez; Markus D. Foote; Alan K. Morris; Mark B. Ratcliffe 002; Jiwon J. Kim; Jonathan W. Weinsaft; Vikas Sharma; Rob S. MacLeod; et al. (CinC, 2020)

An Image-based Approach for 3D Left Atrium Functional Measurements. - Alan Morris; Eugene G. Kholmovski; Nassir Marrouche; Joshua Cates; Shireen Y. Elhabian (CinC, 2020)

Uncertain-DeepSSM: From Images to Probabilistic Shape Models. - Jadie Adams; Riddhish Bhalodia; Shireen Y. Elhabian (ShapeMI@MICCAI, 2020)

Combined Estimation of Shape and Pose for Statistical Analysis of Articulating Joints. - Praful Agrawal; Joseph D. Mozingo; Shireen Y. Elhabian; Andrew E. Anderson; Ross T. Whitaker (ShapeMI@MICCAI, 2020)

Attention-Guided Quality Assessment for Automated Cryo-EM Grid Screening. - Hong Xu 012; David E. Timm; Shireen Y. Elhabian (MICCAI (5), 2020)

Benchmarking off-the-shelf statistical shape modeling tools in clinical applications. - Anupama Goparaju; Alexandre Bône; Nan Hu; Heath B. Henninger; Andrew E. Anderson; Stanley Durrleman; Matthijs Jacxsens; Alan Morris; Ibolya Csecs; Nassir Marrouche; Shireen Y. Elhabian (CoRR, 2020)

Visualization of topology optimization designs with representative subset selection. - Daniel J. Perry; Vahid Keshavarzzadeh; Shireen Y. Elhabian; Robert M. Kirby; Michael Gleicher; Ross T. Whitaker (CoRR, 2020)

An Optimal, Generative Model for Estimating Multi-Label Probabilistic Maps. - Praful Agrawal; Ross T. Whitaker; Shireen Y. Elhabian (IEEE Trans. Medical Imaging, 2020)

A Cardiac Shape Model for Segmentation Uncertainty Quantification. - Jess D. Tate; Shireen Y. Elhabian; Nejib Zemzemi; Wilson W. Good; Peter M. van Dam; Dana H. Brooks; Rob S. MacLeod (CinC, 2021)

Learning Deep Features for Shape Correspondence with Domain Invariance. - Praful Agrawal; Ross T. Whitaker; Shireen Y. Elhabian (CoRR, 2021)

Leveraging unsupervised image registration for discovery of landmark shape descriptor. - Riddhish Bhalodia; Shireen Y. Elhabian; Ladislav Kavan; Ross T. Whitaker (Medical Image Anal., 2021)

Segmentation Uncertainty Quantification in Cardiac Propagation Models. - Jess D. Tate; Nejib Zemzemi; Shireen Y. Elhabian; Beáta Ondrusová; Machteld J. Boonstra; Peter M. van Dam; Akil Narayan 001; Dana H. Brooks; Rob S. MacLeod (CinC, 2022)

From Images to Probabilistic Anatomical Shapes: A Deep Variational Bottleneck Approach. - Jadie Adams; Shireen Y. Elhabian (MICCAI (2), 2022)

Spatiotemporal Cardiac Statistical Shape Modeling: A Data-Driven Approach. - Jadie Adams; Nawazish Khan; Alan Morris; Shireen Y. Elhabian (STACOM@MICCAI, 2022)

Statistical Shape Modeling of Biventricular Anatomy with Shared Boundaries. - Krithika Iyer; Alan Morris; Brian Zenger; Karthik Karanth; Benjamin A. Orkild; Oleksandre Korshak; Shireen Y. Elhabian (STACOM@MICCAI, 2022)

Learning Population-level Shape Statistics and Anatomy Segmentation From Images: A Joint Deep Learning Model. - Wenzheng Tao; Riddhish Bhalodia; Shireen Y. Elhabian (CoRR, 2022)

RENs: Relevance Encoding Networks. - Krithika Iyer; Riddhish Bhalodia; Shireen Y. Elhabian (CoRR, 2022)

Benchmarking off-the-shelf statistical shape modeling tools in clinical applications. - Anupama Goparaju; Krithika Iyer; Alexandre Bône; Nan Hu; Heath B. Henninger; Andrew E. Anderson; Stanley Durrleman; Matthijs Jacxsens; Alan Morris; Ibolya Csecs; Nassir Marrouche; Shireen Y. Elhabian (Medical Image Anal., 2022)

GENs: generative encoding networks. - Surojit Saha; Shireen Y. Elhabian; Ross T. Whitaker (Mach. Learn., 2022)

Can Point Cloud Networks Learn Statistical Shape Models of Anatomies? - Jadie Adams; Shireen Y. Elhabian (MICCAI (1), 2023)

Fully Bayesian VIB-DeepSSM. - Jadie Adams; Shireen Y. Elhabian (MICCAI (3), 2023)

Benchmarking Scalable Epistemic Uncertainty Quantification in Organ Segmentation. - Jadie Adams; Shireen Y. Elhabian (UNSURE@MICCAI, 2023)

Progressive DeepSSM: Training Methodology for Image-To-Shape Deep Models. - Abu Zahid Bin Aziz; Jadie Adams; Shireen Y. Elhabian (ShapeMI@MICCAI, 2023)

Mesh2SSM: From Surface Meshes to Statistical Shape Models of Anatomy. - Krithika Iyer; Shireen Y. Elhabian (MICCAI (1), 2023)

ADASSM: Adversarial Data Augmentation in Statistical Shape Models from Images. - Mokshagna Sai Teja Karanam; Tushar Kataria; Krithika Iyer; Shireen Y. Elhabian (ShapeMI@MICCAI, 2023)

To Pretrain or Not to Pretrain? A Case Study of Domain-Specific Pretraining for Semantic Segmentation in Histopathology. - Tushar Kataria; Beatrice Knudsen; Shireen Y. Elhabian (MILLanD@MICCAI, 2023)

Image2SSM: Reimagining Statistical Shape Models from Images with Radial Basis Functions. - Hong Xu 012; Shireen Y. Elhabian (MICCAI (1), 2023)

Particle-Based Shape Modeling for Arbitrary Regions-of-Interest. - Hong Xu 012; Alan Morris; Shireen Y. Elhabian (ShapeMI@MICCAI, 2023)

Image2SSM: Localization-aware Deep Learning Framework for Statistical Shape Modeling Directly from Images. - Janmesh Ukey; Shireen Y. Elhabian (MIDL, 2023)

Structural Cycle GAN for Virtual Immunohistochemistry Staining of Gland Markers in the Colon. - Shikha Dubey; Tushar Kataria; Beatrice Knudsen; Shireen Y. Elhabian (MLMI@MICCAI (2), 2023)

An NSF REU Site Based on Trust and Reproducibility of Intelligent Computation: Experience Report. - Mary W. Hall; Ganesh Gopalakrishnan; Eric Eide; Johanna Cohoon; Jeff M. Phillips; Mu Zhang 001; Shireen Y. Elhabian; Aditya Bhaskara; Harvey Dam; Artem Yadrov; Tushar Kataria; Amir Mohammad Tavakkoli; et al. (SC Workshops, 2023)

Two-Stage Deep Learning Framework for Quality Assessment of Left Atrial Late Gadolinium Enhanced MRI Images. - K. M. Arefeen Sultan; Benjamin A. Orkild; Alan Morris; Eugene G. Kholmovski; Erik Bieging; Eugene Kwan; Ravi Ranjan; Edward V. R. Di Bella; Shireen Y. Elhabian (STACOM@MICCAI, 2023)

Unsupervised Domain Adaptation for Semantic Segmentation via Feature-space Density Matching. - Tushar Kataria; Beatrice Knudsen; Shireen Y. Elhabian (CoRR, 2023)

Point2SSM: Learning Morphological Variations of Anatomies from Point Cloud. - Jadie Adams; Shireen Y. Elhabian (CoRR, 2023)

ADASSM: Adversarial Data Augmentation in Statistical Shape Models From Images. - Mokshagna Sai Teja Karanam; Tushar Kataria; Shireen Y. Elhabian (CoRR, 2023)

Point2SSM: Learning Morphological Variations of Anatomies from Point Clouds. - Jadie Adams; Shireen Y. Elhabian (ICLR, 2024)

Unsupervised Domain Adaptation for Semantic Segmentation Under Target Data Scarcity. - Tushar Kataria; Beatrice S. Knudsen; Shireen Y. Elhabian (ISBI, 2024)

Optimization-Driven Statistical Models of Anatomies Using Radial Basis Function Shape Representation. - Hong Xu 012; Shireen Y. Elhabian (ISBI, 2024)

Weakly Supervised Bayesian Shape Modeling from Unsegmented Medical Images. - Jadie Adams; Krithika Iyer; Shireen Y. Elhabian (ShapeMI@MICCAI, 2024)

Deformable Vertebra 3D/2D Registration from Biplanar X-Rays Using Particle-Based Shape Modelling. - Benjamin Aubert; Nawazish Khan; Francis Toupin; Manuela Pacheco; Alan Morris; Shireen Y. Elhabian; Kongbin Kang (ShapeMI@MICCAI, 2024)

Estimation and Analysis of Slice Propagation Uncertainty in 3D Anatomy Segmentation. - Rachaell Nihalaani; Tushar Kataria; Jadie Adams; Shireen Y. Elhabian (MICCAI (10), 2024)

HAMIL-QA: Hierarchical Approach to Multiple Instance Learning for Atrial LGE MRI Quality Assessment. - K. M. Arefeen Sultan; Md. Hasibul Husain Hisham; Benjamin A. Orkild; Alan Morris; Eugene G. Kholmovski; Erik Bieging; Eugene Kwan; Ravi Ranjan; Edward V. R. DiBella; Shireen Y. Elhabian (MICCAI (1), 2024)

MASSM: An End-to-End Deep Learning Framework for Multi Anatomy Statistical Shape Modeling Directly From Images. - Janmesh Ukey; Tushar Kataria; Shireen Y. Elhabian (ShapeMI@MICCAI, 2024)

SCorP: Statistics-Informed Dense Correspondence Prediction Directly from Unsegmented Medical Images. - Krithika Iyer; Jadie Adams; Shireen Y. Elhabian (MIUA (1), 2024)

VIMs: Virtual Immunohistochemistry Multiplex Staining via Text-to-Stain Diffusion Trained on Uniplex Stains. - Shikha Dubey; Yosep Chong; Beatrice Knudsen; Shireen Y. Elhabian (MLMI@MICCAI (1), 2024)

Probabilistic 3D Correspondence Prediction from Sparse Unsegmented Images. - Krithika Iyer; Shireen Y. Elhabian (MLMI@MICCAI (2), 2024)

StainDiffuser: MultiTask Dual Diffusion Model for Virtual Staining. - Tushar Kataria; Beatrice Knudsen; Shireen Y. Elhabian (CoRR, 2024)

Point2SSM++: Self-Supervised Learning of Anatomical Shape Models from Point Clouds. - Jadie Adams; Shireen Y. Elhabian (CoRR, 2024)

Weakly SSM : On the Viability of Weakly Supervised Segmentations for Statistical Shape Modeling. - Janmesh Ukey; Tushar Kataria; Shireen Y. Elhabian (CoRR, 2024)

LEDA: Log-Euclidean Diffeomorphic Autoencoder for Efficient Statistical Analysis of Diffeomorphism. - Krithika Iyer; Shireen Y. Elhabian; Sarang C. Joshi (CoRR, 2024)

DeepSSM: A blueprint for image-to-shape deep learning models. - Riddhish Bhalodia; Shireen Y. Elhabian; Jadie Adams; Wenzheng Tao; Ladislav Kavan; Ross T. Whitaker (Medical Image Anal., 2024)

LEDA: Log-Euclidean Diffeomorphism Autoencoder for Efficient Statistical Analysis of Diffeomorphisms. - Krithika Iyer; Shireen Y. Elhabian; Sarang C. Joshi (IPMI (2), 2025)

EFFICIENTMORPH: Parameter-Efficient Transformer-Based Architecture for 3D Image Registration. - Abu Zahid Bin Aziz; Mokshagna Sai Teja Karanam; Tushar Kataria; Shireen Y. Elhabian (WACV, 2025)

MORPH-LER: Log-Euclidean Regularization for Population-Aware Image Registration. - Mokshagna Sai Teja Karanam; Krithika Iyer; Sarang C. Joshi; Shireen Y. Elhabian (CoRR, 2025)

Mesh2SSM++: A Probabilistic Framework for Unsupervised Learning of Statistical Shape Model of Anatomies from Surface Meshes. - Krithika Iyer; Mokshagna Sai Teja Karanam; Shireen Y. Elhabian (CoRR, 2025)

A framework for three-dimensional statistical shape modeling of the proximal femur in Legg-Calvé-Perthes disease. - Luke G. Johnson; Joseph D. Mozingo; Penny R. Atkins; Seaton Schwab; Alan Morris; Shireen Y. Elhabian; David R. Wilson; Harry K. W. Kim; Andrew E. Anderson (Int. J. Comput. Assist. Radiol. Surg., 2025)

BoundarySeg:An Embarrassingly Simple Method To Boost Medical Image Segmentation Performance for Low Data Regimes. - Tushar Kataria; Shireen Y. Elhabian (CoRR, 2025)

ImplicitStainer: Data-Efficient Medical Image Translation for Virtual Antibody-based Tissue Staining Using Local Implicit Functions. - Tushar Kataria; Beatrice Knudsen; Shireen Y. Elhabian (CoRR, 2025)

Adaptive Particle-Based Shape Modeling for Anatomical Surface Correspondence. - Hong Xu 012; Shireen Y. Elhabian (CoRR, 2025)