A Knowledge Driven Regression Model for Gene Expression and Microarray Analysis. - Rong Jin 001; Luo Si; Shireesh Srivastava; Zheng Li; Christina Chan (EMBC, 2006)

A Three Stage Integrative Pathway Search (TIPS(c)) framework to identify toxicity relevant genes and pathways. - Zheng Li; Shireesh Srivastava; Sheenu Mittal; Xuerui Yang; Lufang Sheng; Christina Chan (BMC Bioinform., 2007)

A hierarchical approach employing metabolic and gene expression profiles to identify the pathways that confer cytotoxicity in HepG2 cells. - Zheng Li; Shireesh Srivastava; Xuerui Yang; Sheenu Mittal; Paul Norton; James H. Resau; Brian B. Haab; Christina Chan (BMC Syst. Biol., 2007)

Using Knowledge Driven Matrix Factorization to Reconstruct Modular Gene Regulatory Network. - Yang Zhou 033; Zheng Li; Xuerui Yang; Linxia Zhang; Shireesh Srivastava; Rong Jin 001; Christina Chan (AAAI, 2008)