Identification of N-Glycosylation Sites with Sequence and Structural Features Employing Random Forests. - Shreyas Karnik; Joydeep Mitra; Arunima Singh; Bhaskar D. Kulkarni; V. Sundarajan; Vaidyanathan K. Jayaraman (PReMI, 2009)

Identification of Defensins Employing Recurrence Quantification Analysis and Random Forest Classifiers. - Shreyas Karnik; Ajay Prasad; Alok Diwevedi; V. Sundararajan; Vaidyanathan K. Jayaraman (PReMI, 2009)

CAMP: a useful resource for research on antimicrobial peptides. - Shaini Thomas; Shreyas Karnik; Ram Shankar Barai; Vaidyanathan K. Jayaraman; Susan Idicula-Thomas (Nucleic Acids Res., 2010)

Analysis of Intrinsically Disordered Regions in proteins Using Recurrence Quantification Analysis. - Abhijit J. Kulkarni; Shreyas Karnik; Savita Angadi (Int. J. Bifurc. Chaos, 2011)

Predicting atrial fibrillation and flutter using Electronic Health Records. - Shreyas Karnik; Sin Lam Tan; Bess Berg; Ingrid Glurich; Jinfeng Zhang; Humberto J. Vidaillet; C. David Page; Rajesh Chowdhary (EMBC, 2012)

ClassAMP: A Prediction Tool for Classification of Antimicrobial Peptides. - Shaini Joseph; Shreyas Karnik; Pravin Nilawe; Vaidyanathan K. Jayaraman; Susan Idicula-Thomas (IEEE ACM Trans. Comput. Biol. Bioinform., 2012)