A 1.4-Approximation Algorithm for Two-Sided Scaffold Filling. - Jingjing Ma; Haitao Jiang; Daming Zhu; Shu Zhang 005 (FAW, 2017)

The Longest Common Exemplar Subsequence Problem. - Shu Zhang 005; Ruizhi Wang; Daming Zhu; Haitao Jiang; Haodi Feng; Jiong Guo; Xiaowen Liu (BIBM, 2018)

Can a permutation be sorted by best short swaps?. - Shu Zhang 005; Daming Zhu; Haitao Jiang; Jingjing Ma; Jiong Guo; Haodi Feng (CPM, 2018)

mzMD: A New Storage and Retrieval System for Mass Spectrometry Data. - Runmin Yang; Jingjing Ma; Shu Zhang 005; Yu Zheng; Lusheng Wang 001; Daming Zhu (ICIC (3), 2021)

Sorting a Permutation by Best Short Swaps. - Shu Zhang 005; Daming Zhu; Haitao Jiang; Jiong Guo; Haodi Feng; Xiaowen Liu (Algorithmica, 2021)

mzMD: visualization-oriented MS data storage and retrieval. - Runmin Yang; Jingjing Ma; Shu Zhang 005; Yu Zheng; Lusheng Wang 001; Daming Zhu (Bioinform., 2022)

Hybrid heuristics: for the repetition-free longest common subsequence problem with index-gene. - Qichen Wang 005; Shu Zhang 005 (BIBM, 2023)

Longest Order Conserved Repetition-free Subsequences. - Shu Zhang 005; Qichen Wang 005; Daming Zhu; Haitao Jiang (BIBM, 2023)