LDscaff: LD-based scaffolding of de novo genome assemblies. - Zicheng Zhao; Yingxiao Zhou; Shuai Wang 036; Xiuqing Zhang; Changfa Wang; Shuai Cheng Li 001 (BMC Bioinform., 2020)

PStrain: an iterative microbial strains profiling algorithm for shotgun metagenomic sequencing data. - Shuai Wang 036; Yiqi Jiang; Shuai Cheng Li 001 (Bioinform., 2021)

Comprehensive human respiratory genome catalogue underlies the high resolution and precision of the respiratory microbiome. - Yinhu Li; Guangze Pan; Shuai Wang 036; Zhengtu Li; Ru Yang; Yiqi Jiang; Yu Chen; Shuaicheng Li 001; Bairong Shen (Briefings Bioinform., 2024)

human-vaginal-v1-0 reference for LocalHGT. - Shuai Wang 036 (Zenodo, 2024)

human-oral-v1-0-1 reference for LocalHGT. - Shuai Wang 036 (Zenodo, 2024)