SGD: Saccharomyces Genome Database. - J. Michael Cherry; Caroline Adler; Catherine A. Ball; Stephen A. Chervitz; Selina S. Dwight; Erich T. Hester; Yankai Jia; Gail Juvik; TaiYun Roe; Mark Schroeder; Shuai Weng; David Botstein (Nucleic Acids Res., 1998)

AtDB, the Arabidopsis thaliana database, and graphical-web-display of progress by the Arabidopsis Genome Initiative. - David J. Flanders; Shuai Weng; Fabien X. Petel; J. Michael Cherry (Nucleic Acids Res., 1998)

Using the Saccharomyces Genome Database (SGD) for analysis of protein similarities and structure. - Stephen A. Chervitz; Erich T. Hester; Catherine A. Ball; Kara Dolinski; Selina S. Dwight; Midori A. Harris; Gail Juvik; Alice Malekian; Shannon Roberts; TaiYun Roe; Charles R. Scafe; Mark Schroeder; et al. (Nucleic Acids Res., 1999)

Unified display of Arabidopsis thaliana physical maps from AtDB, the A.thaliana database. - Seung Yon Rhee; Shuai Weng; Deverie K. Bongard-Pierce; Margarita Garcia-Hernandez; Alice Malekian; David J. Flanders; J. Michael Cherry (Nucleic Acids Res., 1999)

Integrating functional genomic information into the Saccharomyces Genome Database. - Catherine A. Ball; Kara Dolinski; Selina S. Dwight; Midori A. Harris; Laurie Issel-Tarver; Andrew Kasarskis; Charles R. Scafe; Gavin Sherlock; Gail Binkley; Heng Jin; Miroslava Kaloper; Sidney D. Orr; et al. (Nucleic Acids Res., 2000)

Saccharomyces Genome Database provides tools to survey gene expression and functional analysis data. - Catherine A. Ball; Heng Jin; Gavin Sherlock; Shuai Weng; John C. Matese; Rey Andrada; Gail Binkley; Kara Dolinski; Selina S. Dwight; Midori A. Harris; Laurie Issel-Tarver; Mark Schroeder; et al. (Nucleic Acids Res., 2001)

The Stanford Microarray Database. - Gavin Sherlock; Tina Hernandez-Boussard; Andrew Kasarskis; Gail Binkley; John C. Matese; Selina S. Dwight; Miroslava Kaloper; Shuai Weng; Heng Jin; Catherine A. Ball; Michael B. Eisen; Paul T. Spellman; et al. (Nucleic Acids Res., 2001)

Saccharomyces Genome Database (SGD) provides secondary gene annotation using the Gene Ontology (GO). - Selina S. Dwight; Midori A. Harris; Kara Dolinski; Catherine A. Ball; Gail Binkley; Karen R. Christie; Dianna G. Fisk; Laurie Issel-Tarver; Mark Schroeder; Gavin Sherlock; Anand Sethuraman; Shuai Weng; et al. (Nucleic Acids Res., 2002)

Gene Function, Metabolic Pathways and Comparative Genomics in Yeast. - Qing Dong; Rama Balakrishnan; Gail Binkley; Karen R. Christie; Maria C. Costanzo; Kara Dolinski; Selina S. Dwight; Stacia R. Engel; Dianna G. Fisk; Jodi E. Hirschman; Eurie L. Hong; Robert S. Nash; et al. (CSB, 2003)

Saccharomyces Genome Database (SGD) provides biochemical and structural information for budding yeast proteins. - Shuai Weng; Qing Dong; Rama Balakrishnan; Karen R. Christie; Maria C. Costanzo; Kara Dolinski; Selina S. Dwight; Stacia R. Engel; Dianna G. Fisk; Eurie L. Hong; Laurie Issel-Tarver; Anand Sethuraman; et al. (Nucleic Acids Res., 2003)

Saccharomyces genome database: Underlying principles and organisation. - Selina S. Dwight; Rama Balakrishnan; Karen R. Christie; Maria C. Costanzo; Kara Dolinski; Stacia R. Engel; Becket Feierbach; Dianna G. Fisk; Jodi E. Hirschman; Eurie L. Hong; Laurie Issel-Tarver; Robert S. Nash; et al. (Briefings Bioinform., 2004)

GO: : TermFinder–open source software for accessing Gene Ontology information and finding significantly enriched Gene Ontology terms associated with a list of genes. - Elizabeth I. Boyle; Shuai Weng; Jeremy Gollub; Heng Jin; David Botstein; J. Michael Cherry; Gavin Sherlock (Bioinform., 2004)

Saccharomyces Genome Database (SGD) provides tools to identify and analyze sequences from Saccharomyces cerevisiae and related sequences from other organisms. - Karen R. Christie; Shuai Weng; Rama Balakrishnan; Maria C. Costanzo; Kara Dolinski; Selina S. Dwight; Stacia R. Engel; Becket Feierbach; Dianna G. Fisk; Jodi E. Hirschman; Eurie L. Hong; Laurie Issel-Tarver; et al. (Nucleic Acids Res., 2004)

Fungal BLAST and Model Organism BLASTP Best Hits: new comparison resources at the Saccharomyces Genome Database (SGD). - Rama Balakrishnan; Karen R. Christie; Maria C. Costanzo; Kara Dolinski; Selina S. Dwight; Stacia R. Engel; Dianna G. Fisk; Jodi E. Hirschman; Eurie L. Hong; Robert S. Nash; Rose Oughtred; Marek S. Skrzypek; et al. (Nucleic Acids Res., 2005)

PatMatch: a program for finding patterns in peptide and nucleotide sequences. - Thomas Yan; Danny Yoo; Tanya Z. Berardini; Lukas A. Mueller; Dan C. Weems; Shuai Weng; J. Michael Cherry; Seung Yon Rhee (Nucleic Acids Res., 2005)

Genome Snapshot: a new resource at the Saccharomyces Genome Database (SGD) presenting an overview of the Saccharomyces cerevisiae genome. - Jodi E. Hirschman; Rama Balakrishnan; Karen R. Christie; Maria C. Costanzo; Selina S. Dwight; Stacia R. Engel; Dianna G. Fisk; Eurie L. Hong; Michael S. Livstone; Robert S. Nash; Julie Park; Rose Oughtred; et al. (Nucleic Acids Res., 2006)

Tetrahymena Genome Database (TGD): a new genomic resource for Tetrahymena thermophila research. - Nicholas A. Stover; Cynthia J. Krieger; Gail Binkley; Qing Dong; Dianna G. Fisk; Robert S. Nash; Anand Sethuraman; Shuai Weng; J. Michael Cherry (Nucleic Acids Res., 2006)

Expanded protein information at SGD: new pages and proteome browser. - Robert S. Nash; Shuai Weng; Benjamin C. Hitz; Rama Balakrishnan; Karen R. Christie; Maria C. Costanzo; Selina S. Dwight; Stacia R. Engel; Dianna G. Fisk; Jodi E. Hirschman; Eurie L. Hong; Michael S. Livstone; et al. (Nucleic Acids Res., 2007)

Gene Ontology annotations at SGD: new data sources and annotation methods. - Eurie L. Hong; Rama Balakrishnan; Qing Dong; Karen R. Christie; Julie Park; Gail Binkley; Maria C. Costanzo; Selina S. Dwight; Stacia R. Engel; Dianna G. Fisk; Jodi E. Hirschman; Benjamin C. Hitz; et al. (Nucleic Acids Res., 2008)

Saccharomyces Genome Database provides mutant phenotype data. - Stacia R. Engel; Rama Balakrishnan; Gail Binkley; Karen R. Christie; Maria C. Costanzo; Selina S. Dwight; Dianna G. Fisk; Jodi E. Hirschman; Benjamin C. Hitz; Eurie L. Hong; Cynthia J. Krieger; Michael S. Livstone; et al. (Nucleic Acids Res., 2010)

Saccharomyces Genome Database: the genomics resource of budding yeast. - J. Michael Cherry; Eurie L. Hong; Craig Amundsen; Rama Balakrishnan; Gail Binkley; Esther T. Chan; Karen R. Christie; Maria C. Costanzo; Selina S. Dwight; Stacia R. Engel; Dianna G. Fisk; Jodi E. Hirschman; et al. (Nucleic Acids Res., 2012)

Saccharomyces genome database provides new regulation data. - Maria C. Costanzo; Stacia R. Engel; Edith D. Wong; Paul Lloyd; Kalpana Karra; Esther T. Chan; Shuai Weng; Kelley M. Paskov; Greg R. Roe; Gail Binkley; Benjamin C. Hitz; J. Michael Cherry (Nucleic Acids Res., 2014)

From one to many: expanding the Saccharomyces cerevisiae reference genome panel. - Stacia R. Engel; Shuai Weng; Gail Binkley; Kelley M. Paskov; Giltae Song; J. Michael Cherry (Database J. Biol. Databases Curation, 2016)

Integration of new alternative reference strain genome sequences into the Saccharomyces genome database. - Giltae Song; Rama Balakrishnan; Gail Binkley; Maria C. Costanzo; Kyla S. Dalusag; Janos Demeter; Stacia R. Engel; Sage T. Hellerstedt; Kalpana Karra; Benjamin C. Hitz; Robert S. Nash; Kelley M. Paskov; et al. (Database J. Biol. Databases Curation, 2016)

The Saccharomyces Genome Database Variant Viewer. - Travis K. Sheppard; Benjamin C. Hitz; Stacia R. Engel; Giltae Song; Rama Balakrishnan; Gail Binkley; Maria C. Costanzo; Kyla S. Dalusag; Janos Demeter; Sage T. Hellerstedt; Kalpana Karra; Robert S. Nash; et al. (Nucleic Acids Res., 2016)

Curated protein information in the Saccharomyces genome database. - Sage T. Hellerstedt; Robert S. Nash; Shuai Weng; Kelley M. Paskov; Edith D. Wong; Kalpana Karra; Stacia R. Engel; J. Michael Cherry (Database J. Biol. Databases Curation, 2017)

Updated regulation curation model at the Saccharomyces Genome Database. - Stacia R. Engel; Marek S. Skrzypek; Sage T. Hellerstedt; Edith D. Wong; Robert S. Nash; Shuai Weng; Gail Binkley; Travis K. Sheppard; Kalpana Karra; J. Michael Cherry (Database J. Biol. Databases Curation, 2018)

Saccharomyces genome database informs human biology. - Marek S. Skrzypek; Robert S. Nash; Edith D. Wong; Kevin A. MacPherson; Sage T. Hellerstedt; Stacia R. Engel; Kalpana Karra; Shuai Weng; Travis K. Sheppard; Gail Binkley; Matt Simison; Stuart R. Miyasato; et al. (Nucleic Acids Res., 2018)

Integration of macromolecular complex data into the Saccharomyces Genome Database. - Edith D. Wong; Marek S. Skrzypek; Shuai Weng; Gail Binkley; Birgit H. M. Meldal; Livia Perfetto; Sandra E. Orchard; Stacia R. Engel; J. Michael Cherry; SGD Project (Database J. Biol. Databases Curation, 2019)

Incorporation of a unified protein abundance dataset into the Saccharomyces genome database. - Robert S. Nash; Shuai Weng; Kalpana Karra; Edith D. Wong; Stacia R. Engel; J. Michael Cherry; SGD Project (Database J. Biol. Databases Curation, 2020)

Alliance of Genome Resources Portal: unified model organism research platform. - Julie Agapite; Laurent-Philippe Albou; Suzi A. Aleksander; Joanna Argasinska; Valerio Arnaboldi; Helen Attrill; Susan M. Bello; Judith A. Blake; Olin Blodgett; Yvonne M. Bradford; Carol J. Bult; Scott Cain; et al. (Nucleic Acids Res., 2020)

Transcriptome visualization and data availability at the Saccharomyces Genome Database. - Patrick C. Ng; Edith D. Wong; Kevin A. MacPherson; Suzi A. Aleksander; Joanna Argasinska; Barbara Dunn; Robert S. Nash; Marek S. Skrzypek; Felix Gondwe; Sagar Jha; Kalpana Karra; Shuai Weng; et al. (Nucleic Acids Res., 2020)

The Gene Ontology resource: enriching a GOld mine. - Seth Carbon; Eric Douglass; Benjamin M. Good; Deepak R. Unni; Nomi L. Harris; Christopher J. Mungall; Siddartha Basu; Rex L. Chisholm; Robert J. Dodson; Eric Hartline; Petra Fey; Paul D. Thomas; et al. (Nucleic Acids Res., 2021)

RNAcentral 2021: secondary structure integration, improved sequence search and new member databases. - Blake A. Sweeney; Anton I. Petrov; Carlos Eduardo Ribas; Robert D. Finn; Alex Bateman; Maciej Szymanski; Wojciech M. Karlowski; Stefan E. Seemann; Jan Gorodkin; Jamie J. Cannone; Robin Ray Gutell; Simon Kay; et al. (Nucleic Acids Res., 2021)

Research on Multi-VSG Parallel Control Strategy Based on Sliding Mode Active Disturbance Rejection. - Fanxing Rao; Yupeng Xiang; Shuai Weng; Huimin Xiong; Xiaopin Yang; Jizheng Zhang; Cui Wang; Yunchuan Ding (Complex., 2025)