RGAAT: A Reference-based Genome Assembly and Annotation Tool for New Genomes and Upgrade of Known Genomes. - Wanfei Liu; Shuangyang Wu; Qiang Lin; Shenghan Gao; Feng Ding 009; Xiaowei Zhang; Hasan Awad Aljohi; Jun Yu 004; Songnian Hu (Genom. Proteom. Bioinform., 2018)

REDO: RNA Editing Detection in Plant Organelles Based on Variant Calling Results. - Shuangyang Wu; Wanfei Liu; Hasan Awad Aljohi; Sarah A. Alromaih; Ibrahim O. Alanazi; Qiang Lin; Jun Yu 004; Songnian Hu (J. Comput. Biol., 2018)

IC4R-2.0: Rice Genome Reannotation Using Massive RNA-seq Data. - Jian Sang; Dong Zou; Zhennan Wang; Fan Wang; Yuansheng Zhang; Lin Xia; Zhaohua Li; Lina Ma; Mengwei Li; Bingxiang Xu; Xiaonan Liu; Shuangyang Wu; et al. (Genom. Proteom. Bioinform., 2020)

Research on the Network Evolution of Rainstorm Disaster Chains. - Shuangyang Wu; Yingbo Ji; Yuan Qi (BIC, 2022)

Genome of the Giant Panda Roundworm Illuminates Its Host Shift and Parasitic Adaptation. - Yue Xie; Sen Wang; Shuangyang Wu; Shenghan Gao; Qingshu Meng; Chengdong Wang; Jingchao Lan; Li Luo; Xuan Zhou; Jing Xu; Xiaobin Gu; Ran He 004; et al. (Genom. Proteom. Bioinform., 2022)