Comparative RNA-seq Analysis in the Unsequenced Axolotl: The Oncogene Burst Highlights Early Gene Expression in the Blastema. - Ron M. Stewart; Cynthia Alexander Rascón; Shulan Tian; Jeff Nie; Chris Barry; Li-Fang Chu; Hamisha Ardalani; Ryan J. Wagner; Mitchell D. Probasco; Jennifer M. Bolin; Ning Leng; Srikumar Sengupta; et al. (PLoS Comput. Biol., 2013)

EBSeq-HMM: a Bayesian approach for identifying gene-expression changes in ordered RNA-seq experiments. - Ning Leng; Yuan Li; Brian E. McIntosh; Bao Kim Nguyen; Bret Duffin; Shulan Tian; James A. Thomson; Colin N. Dewey; Ron M. Stewart; Christina Kendziorski (Bioinform., 2015)

Impact of post-alignment processing in variant discovery from whole exome data. - Shulan Tian; Huihuang Yan; Michael Kalmbach; Susan L. Slager (BMC Bioinform., 2016)

Comparative analysis of de novo assemblers for variation discovery in personal genomes. - Shulan Tian; Huihuang Yan; Eric W. Klee; Michael Kalmbach; Susan L. Slager (Briefings Bioinform., 2018)

Identification of missing variants by combining multiple analytic pipelines. - Yingxue Ren; Joseph S. Reddy; Cyril Pottier; Vivekananda Sarangi; Shulan Tian; Jason P. Sinnwell; Shannon K. McDonnell; Joanna M. Biernacka; Minerva M. Carrasquillo; Owen A. Ross; Nilüfer Ertekin-Taner; Rosa Rademakers; et al. (BMC Bioinform., 2018)

Deep Phenotyping of Non-Alcoholic Fatty Liver Disease Patients with Genetic Factors for Insights into the Complex Disease. - Tahmina Sultana Priya; Fan Leng; Anthony C. Luehrs; Eric W. Klee; Alina M. Allen; Konstantinos N. Lazaridis; Danfeng Yao; Shulan Tian (CoRR, 2023)