A comprehensive evaluation of SAM, the SAM R-package and a simple modification to improve its performance. - Shunpu Zhang (BMC Bioinform., 2007)

On correcting the overestimation of the permutation-based false discovery rate estimator. - Shuo Jiao; Shunpu Zhang (Bioinform., 2008)

An improved string composition method for sequence comparison. - Guoqing Lu; Shunpu Zhang; Xiang Fang (BMC Bioinform., 2008)

Estimating the Proportion of Equivalently Expressed Genes in Microarray Data Based on Transformed Test Statistics. - Shuo Jiao; Shunpu Zhang (J. Comput. Biol., 2010)

Model-based clustering with certainty estimation: implication for clade assignment of influenza viruses. - Shunpu Zhang; Zhong Li; Kevin Beland; Guoqing Lu (BMC Bioinform., 2016)

Deep Epidemiological Modeling by Black-box Knowledge Distillation: An Accurate Deep Learning Model for COVID-19. - Dongdong Wang; Shunpu Zhang; Liqiang Wang (AAAI, 2021)

Identifying host-specific amino acid signatures for influenza A viruses using an adjusted entropy measure. - Yixiang Zhang; Kent M. Eskridge; Shunpu Zhang; Guoqing Lu (BMC Bioinform., 2022)

Enhancing Retinal Vascular Structure Segmentation in Images With a Novel Design Two-Path Interactive Fusion Module Model. - Rui Yang; Shunpu Zhang (CoRR, 2024)