Evaluation of protein-ligand binding free energy focused on its entropic components. - Shuntaro Chiba; Yuichi Harano; Roland Roth; Masahiro Kinoshita; Minoru Sakurai (J. Comput. Chem., 2012)

Evaluation of protein-ligand binding free energy focused on its entropic components [J. Comp. Chem. 33, 550-560]. - Shuntaro Chiba; Yuichi Harano; Roland Roth; Masahiro Kinoshita; Minoru Sakurai (J. Comput. Chem., 2012)

A morphometric approach for the accurate solvation thermodynamics of proteins and ligands. - Yuichi Harano; Roland Roth; Shuntaro Chiba (J. Comput. Chem., 2013)

Force-field parametrization based on radial and energy distribution functions. - Shuntaro Chiba; Yasushi Okuno; Teruki Honma; Mitsunori Ikeguchi (J. Comput. Chem., 2019)

Coarse-Grained Diffraction Template Matching Model to Retrieve Multiconformational Models for Biomolecule Structures from Noisy Diffraction Patterns. - Atsushi Tokuhisa; Ryo Kanada; Shuntaro Chiba; Kei Terayama; Yuta Isaka; Biao Ma; Narutoshi Kamiya; Yasushi Okuno (J. Chem. Inf. Model., 2020)

eSkip-Finder: a machine learning-based web application and database to identify the optimal sequences of antisense oligonucleotides for exon skipping. - Shuntaro Chiba; Kenji Rowel Q. Lim; Narin Sheri; Saeed Anwar; Esra Erkut; Md Nur Ahad Shah; Tejal Aslesh; Stanley Woo; Omar Sheikh; Rika Maruyama; Hiroaki Takano; Katsuhiko Kunitake; et al. (Nucleic Acids Res., 2021)