Multi-study Integration of Brain Cancer Transcriptomes Reveals Organ-Level Molecular Signatures. - Jaeyun Sung; Pan-Jun Kim; Shuyi Ma; Cory C. Funk; Andrew T. Magis; Yuliang Wang; Leroy E. Hood; Donald Geman; Nathan D. Price 001 (PLoS Comput. Biol., 2013)

Integrated Modeling of Gene Regulatory and Metabolic Networks in Mycobacterium tuberculosis. - Shuyi Ma; Kyle J. Minch; Tige R. Rustad; Samuel Hobbs; Suk-Lin Zhou; David R. Sherman; Nathan D. Price 001 (PLoS Comput. Biol., 2015)

A locality constrained self-representation approach for unsupervised feature selection. - Cuihua Wang; Shuyi Ma; Chao Bi; Miao Qi; Hui Sun; Yugen Yi (Int. J. Comput. Sci. Eng., 2017)

Developing a hybrid model of information entropy and unascertained measurement theory for evaluation of the excavatability in rock mass. - Jian Zhou 007; Chao Chen; Danial Jahed Armaghani; Shuyi Ma (Eng. Comput., 2022)

Multi-Mode Ultrasonic Guided Waves Based Damage Detection in L-Bars with Asymmetric Cross-Section with Sum of Multiple Signals Method. - Zhengyan Yang; Jiaqi Zhang; Kehai Liu; Yuebin Zheng; Shuyi Ma; Zhanjun Wu (Sensors, 2022)

Performance Analysis of Multi-RIS Aided Communication Under Weibull Fading. - Longze Li; Haitao Zhao; Wenxue Sun; Zhuoran Xu; Yihang Jia; Shuyi Ma (MSN, 2023)

Ten simple rules for managing laboratory information. - Casey-Tyler Berezin; Luis U. Aguilera; Sonja Billerbeck; Philip E. Bourne; Douglas Densmore; Paul S. Freemont; Thomas E. Gorochowski; Sarah I. Hernandez; Nathan J. Hillson; Connor R. King; Michael Köpke; Shuyi Ma; et al. (PLoS Comput. Biol., 2023)

A cluster-oriented task assignment optimization for green high-performance computing center operations. - Jin Li; Shuyi Ma; Min Xie (Comput. Ind. Eng., 2025)

Guided-Wave-Based Real-Time Damage Detection in Composite Structures: A Gramian Angular Field Image Coding Lightweight Network Approach. - Jitong Ma; Wenqiang Bao; Zhengyan Yang; Hongjuan Yang; Shuyi Ma; Lei Yang 054; Zhanjun Wu (IEEE Trans. Instrum. Meas., 2025)