Systematic Comparison and Comprehensive Evaluation of 80 Amino Acid Descriptors in Peptide QSAR Modeling. - Peng Zhou 003; Qian Liu; Ting Wu; Qingqing Miao; Shuyong Shang; Heyi Wang; Zheng Chen; Shaozhou Wang; Heyan Wang (J. Chem. Inf. Model., 2021)

Integrated unsupervised-supervised modeling and prediction of protein-peptide affinities at structural level. - Peng Zhou 003; Li Wen; Jing Lin; Li Mei; Qian Liu; Shuyong Shang; Juelin Li; Jianping Shu (Briefings Bioinform., 2022)

Rational molecular design of novel class-III peptidic antagonists to competitively disrupt human PPARδ self-binding peptide. - Yue Peng; Zilong Li; Yunyi Zhang; Haiyang Ye; Li Mei; Shuyong Shang; Peng Zhou 003 (J. Comput. Aided Mol. Des., 2025)