Performance Analysis and Derived Parallelization Strategy for a SCF Program at the Hartree Fock Level. - Siegfried Höfinger; Othmar Steinhauser; Peter Zinterhof (ACPC, 1999)

Load Balancing for the Electronic Structure Program GREMLIN in a Very Heterogenous SSH-Connected WAN-Cluster of UNIX-Type Hosts. - Siegfried Höfinger (International Conference on Computational Science (2), 2001)

Dielectric relaxation in proteins: a continuum electrostatics model incorporating dielectric heterogeneity of the protein and time-dependent charges. - Siegfried Höfinger; Thomas Simonson (J. Comput. Chem., 2001)

Dynamic Load Equilibration for Cyclic Applications in Distributed Systems. - Siegfried Höfinger (International Conference on Computational Science (2), 2002)

Automatic Runtime Load Balancing of Dedicated Applications in Heterogeneous Environments. - Siegfried Höfinger (PVM/MPI, 2002)

Parallel Global Optimization of High-Dimensional Problems. - Siegfried Höfinger; Torsten Schindler; András Aszódi (PVM/MPI, 2002)

Latency reduction from runtime-interference to the parallel Quantum Chemistry program GREMLIN in heterogeneous and homogeneous environments. - Siegfried Höfinger (Future Gener. Comput. Syst., 2003)

What Size Cluster Equals a Dedicated Chip. - Siegfried Höfinger (PVM/MPI, 2004)

Probing the Applicability of Polarizable Force-Field Molecular Dynamics for Parallel Architectures: A Comparison of Digital MPI with LAM-MPI and MPICH2. - Benjamin Almeida; Reema Mahajan; Dieter Kranzlmüller; Jens Volkert; Siegfried Höfinger (PVM/MPI, 2005)

Solving the Poisson-Boltzmann equation with the specialized computer chip MD-GRAPE-2. - Siegfried Höfinger (J. Comput. Chem., 2005)

Systematic study of the boundary composition in Poisson Boltzmann calculations. - Parimal Kar; Yanjie Wei; Ulrich H. E. Hansmann; Siegfried Höfinger (J. Comput. Chem., 2007)

Current performance gains from utilizing the GPU or the ASIC MDGRAPE-3 within an enhanced Poisson Boltzmann approach. - Tetsu Narumi; Kenji Yasuoka; Makoto Taiji; Siegfried Höfinger (J. Comput. Chem., 2009)

Fast Calculation of Electrostatic Potentials on the GPU or the ASIC MD-GRAPE-3. - Tetsu Narumi; Kenji Yasuoka; Makoto Taiji; Francesco Zerbetto; Siegfried Höfinger (Comput. J., 2011)

GPU-accelerated computation of electron transfer. - Siegfried Höfinger; Angela Acocella; Sergiu C. Pop; Tetsu Narumi; Kenji Yasuoka; Titus Beu; Francesco Zerbetto (J. Comput. Chem., 2012)

Modelling parallel overhead from simple run-time records. - Siegfried Höfinger; Ernst J. Haunschmid (J. Supercomput., 2017)

Fast Approximate Evaluation of Parallel Overhead from a Minimal Set of Measured Execution Times. - Siegfried Höfinger; Thomas Ruh; Ernst J. Haunschmid (Parallel Process. Lett., 2018)

The European master for HPC curriculum. - Pascal Bouvry; Mats Brorsson; Ramon Canal; Aryan Eftekhari; Siegfried Höfinger; Didier Smets; Harald Köstler; Tomás Kozubek; Ezhilmathi Krishnasamy; Josep Llosa; Alexandra Lukas-Rother; Xavier Martorell; et al. (J. Parallel Distributed Comput., 2025)