The Zebrafish Information Network: the zebrafish model organism database. - Judy Sprague; Leyla Bayraktaroglu; Dave Clements; Tom Conlin; David Fashena; Ken Frazer; Melissa A. Haendel; Douglas G. Howe; Prita Mani; Sridhar Ramachandran; Kevin Schaper; Erik Segerdell; et al. (Nucleic Acids Res., 2006)

The Zebrafish Information Network: the zebrafish model organism database provides expanded support for genotypes and phenotypes. - Judy Sprague; Leyla Bayraktaroglu; Yvonne M. Bradford; Tom Conlin; Nathan A. Dunn; David Fashena; Ken Frazer; Melissa A. Haendel; Douglas G. Howe; Jonathan Knight; Prita Mani; Sierra A. T. Moxon; et al. (Nucleic Acids Res., 2008)

ZFIN: enhancements and updates to the zebrafish model organism database. - Yvonne M. Bradford; Tom Conlin; Nathan A. Dunn; David Fashena; Ken Frazer; Douglas G. Howe; Jonathan Knight; Prita Mani; Ryan Martin; Sierra A. T. Moxon; Holly Paddock; Christian Pich 002; et al. (Nucleic Acids Res., 2011)

ZFIN, the Zebrafish Model Organism Database: increased support for mutants and transgenics. - Douglas G. Howe; Yvonne M. Bradford; Tom Conlin; Anne E. Eagle; David Fashena; Ken Frazer; Jonathan Knight; Prita Mani; Ryan Martin; Sierra A. T. Moxon; Holly Paddock; Christian Pich 002; et al. (Nucleic Acids Res., 2013)

The Zebrafish Model Organism Database: new support for human disease models, mutation details, gene expression phenotypes and searching. - Douglas G. Howe; Yvonne M. Bradford; Anne E. Eagle; David Fashena; Ken Frazer; Patrick Kalita; Prita Mani; Ryan Martin; Sierra Taylor Moxon; Holly Paddock; Christian Pich 002; Sridhar Ramachandran; et al. (Nucleic Acids Res., 2017)

The Zebrafish Information Network: new support for non-coding genes, richer Gene Ontology annotations and the Alliance of Genome Resources. - Leyla Ruzicka; Douglas G. Howe; Sridhar Ramachandran; Sabrina Toro; Ceri E. Van Slyke; Yvonne M. Bradford; Anne E. Eagle; David Fashena; Ken Frazer; Patrick Kalita; Prita Mani; Ryan Martin; et al. (Nucleic Acids Res., 2019)

Alliance of Genome Resources Portal: unified model organism research platform. - Julie Agapite; Laurent-Philippe Albou; Suzi A. Aleksander; Joanna Argasinska; Valerio Arnaboldi; Helen Attrill; Susan M. Bello; Judith A. Blake; Olin Blodgett; Yvonne M. Bradford; Carol J. Bult; Scott Cain; et al. (Nucleic Acids Res., 2020)

The Linked Data Modeling Language (LinkML): A General-Purpose Data Modeling Framework Grounded in Machine-Readable Semantics. - Sierra A. T. Moxon; Harold Solbrig; Deepak R. Unni; Dazhi Jiao; Richard M. Bruskiewich; James P. Balhoff; Gaurav Vaidya; William D. Duncan; Harshad Hegde; Mark A. Miller; Matthew H. Brush; Nomi L. Harris; et al. (ICBO, 2021)

The Zebrafish Information Network: major gene page and home page updates. - Douglas G. Howe; Sridhar Ramachandran; Yvonne M. Bradford; David Fashena; Sabrina Toro; Anne E. Eagle; Ken Frazer; Patrick Kalita; Prita Mani; Ryan Martin; Sierra Taylor Moxon; Holly Paddock; et al. (Nucleic Acids Res., 2021)

A Simple Standard for Sharing Ontological Mappings (SSSOM). - Nicolas Matentzoglu; James P. Balhoff; Susan M. Bello; Chris Bizon; Matthew H. Brush; Tiffany J. Callahan; Christopher G. Chute; William D. Duncan; Chris T. A. Evelo; Davera Gabriel; John B. Graybeal; Alasdair J. G. Gray; et al. (Database J. Biol. Databases Curation, 2022)

Biolink Model: A Universal Schema for Knowledge Graphs in Clinical, Biomedical, and Translational Science. - Deepak R. Unni; Sierra A. T. Moxon; Michael Bada; Matthew H. Brush; Richard M. Bruskiewich; Paul A. Clemons; Vlado Dancík; Michel Dumontier; Karamarie Fecho; Gustavo Glusman; Jennifer J. Hadlock; Nomi L. Harris; et al. (CoRR, 2022)

KG-Hub - Building and Exchanging Biological Knowledge Graphs. - J. Harry Caufield; Tim E. Putman; Kevin Schaper; Deepak R. Unni; Harshad Hegde; Tiffany J. Callahan; Luca Cappelletti; Sierra A. T. Moxon; Vida Ravanmehr; Seth Carbon; Lauren E. Chan; Katherina Cortes; et al. (CoRR, 2023)

MapperGPT: Large Language Models for Linking and Mapping Entities. - Nicolas Matentzoglu; J. Harry Caufield; Harshad B. Hegde; Justin T. Reese; Sierra A. T. Moxon; Hyeongsik Kim 001; Nomi L. Harris; Melissa A. Haendel; Christopher J. Mungall (CoRR, 2023)

Structured Prompt Interrogation and Recursive Extraction of Semantics (SPIRES): a method for populating knowledge bases using zero-shot learning. - J. Harry Caufield; Harshad Hegde; Vincent Emonet; Nomi L. Harris; Marcin P. Joachimiak; Nicolas Matentzoglu; Hyeongsik Kim 001; Sierra A. T. Moxon; Justin T. Reese; Melissa A. Haendel; Peter N. Robinson; Christopher J. Mungall (Bioinform., 2024)