Ring optimization with extinction. - Daniel A. Ashlock; Sierra Gillis; Gary B. Fogel (CEC, 2015)

Evolving DNA classifiers with extinction based ring optimization. - Daniel A. Ashlock; Sierra Gillis; Jennifer Garner; Gary B. Fogel (CIBCB, 2015)

The do what's possible representation. - Daniel A. Ashlock; Sierra Gillis; Andrew McEachern; Jeffrey Tsang (CEC, 2016)

Infinite string block matching features for DNA classification. - Daniel A. Ashlock; Sierra Gillis; Wendy Ashlock (CIBCB, 2017)

Large Block Matching Characters for Dehydrin Classification. - Daniel A. Ashlock; Sierra Gillis; Amanda Saunders; Andrew Riley (CIBCB, 2019)

PyClone-VI: scalable inference of clonal population structures using whole genome data. - Sierra Gillis; Andrew Roth (BMC Bioinform., 2020)