DPRml: distributed phylogeny reconstruction by maximum likelihood. - Thomas M. Keane; Thomas J. Naughton; Simon A. A. Travers; James O. McInerney; Grace P. McCormack (Bioinform., 2005)

Building Large Phylogenetic Trees on Coarse-Grained Parallel Machines. - Thomas M. Keane; Andrew J. Page; Thomas J. Naughton; Simon A. A. Travers; James O. McInerney (Algorithmica, 2006)

QTrim: a novel tool for the quality trimming of sequence reads generated using the Roche/454 sequencing platform. - Ram Shrestha; Baruch Lubinsky; Vijay B. Bansode; Mónica B. J. Moinz; Grace P. McCormack; Simon A. A. Travers (BMC Bioinform., 2014)