Visualization of genomic data with the Hilbert curve. - Simon Anders (Bioinform., 2009)

ShortRead: a bioconductor package for input, quality assessment and exploration of high-throughput sequence data. - Martin Morgan; Simon Anders; Michael F. Lawrence; Patrick Aboyoun; Hervé Pagès; Robert Gentleman (Bioinform., 2009)

HTSeq - a Python framework to work with high-throughput sequencing data. - Simon Anders; Paul Theodor Pyl; Wolfgang Huber (Bioinform., 2015)

FourCSeq: analysis of 4C sequencing data. - Felix A. Klein; Tibor Pakozdi; Simon Anders; Yad Ghavi-Helm; Eileen E. M. Furlong; Wolfgang Huber (Bioinform., 2015)

Focused multidimensional scaling: interactive visualization for exploration of high-dimensional data. - Lea M. Urpa; Simon Anders (BMC Bioinform., 2019)

Analysing high-throughput sequencing data in Python with HTSeq 2.0. - Givanna H. Putri; Simon Anders; Paul Theodor Pyl; John E. Pimanda; Fabio Zanini (Bioinform., 2022)