Extraction of the cerebral cortical boundaries from MRI for measurement of cortical thickness. - Simon Fristed Eskildsen; Mark Uldahl; Lasse Riis Østergaard (Image Processing, 2005)

Active Surface Approach for Extraction of the Human Cerebral Cortex from MRI. - Simon F. Eskildsen; Lasse Riis Østergaard (MICCAI (2), 2006)

Quantitative Comparison of Two Cortical Surface Extraction Methods Using MRI Phantoms. - Simon F. Eskildsen; Lasse Riis Østergaard (MICCAI (1), 2007)

Early detection of AD using cortical thickness measurements. - M. Spjuth; Flemming Gravesen; Simon F. Eskildsen; Lasse Riis Østergaard (Image Processing, 2007)

Evaluation of Five Algorithms for Mapping Brain Cortical Surfaces. - Simon F. Eskildsen; Lasse Riis Østergaard (SIBGRAPI, 2008)

Cortical volumes and atrophy rates in FTD-3 CHMP2B mutation carriers and related non-carriers. - Simon F. Eskildsen; Lasse Riis Østergaard; Anders B. Rodell; Leif Østergaard; Jørgen E. Nielsen; Adrian M. Isaacs; Peter Johannsen (NeuroImage, 2009)

Segmentation of Cortical MS Lesions on MRI Using Automated Laminar Profile Shape Analysis. - Christine L. Tardif; D. Louis Collins; Simon F. Eskildsen; John B. Richardson; G. Bruce Pike (MICCAI (3), 2010)

Partial volume correction using cortical surfaces. - Kamille R. Blaasvær; Camilla Dremstrup Haubro; Simon F. Eskildsen; Per Borghammer; Daniel Otzen; Lasse Riis Østergaard (Image Processing, 2010)

Simultaneous Segmentation and Grading of Hippocampus for Patient Classification with Alzheimer's Disease. - Pierrick Coupé; Simon F. Eskildsen; José V. Manjón; Vladimir S. Fonov; D. Louis Collins (MICCAI (3), 2011)

A New Framework for Analyzing Structural Volume Changes of Longitudinal Brain MRI Data. - Bérengère Aubert-Broche; Vladimir S. Fonov; Daniel García-Lorenzo; Abderazzak Mouiha; Nicolas Guizard; Pierrick Coupé; Simon F. Eskildsen; D. Louis Collins (STIA, 2012)

Spatio-temporal Regularization for Longitudinal Registration to an Unbiased 3D Individual Template. - Nicolas Guizard; Vladimir S. Fonov; Daniel García-Lorenzo; Bérengère Aubert-Broche; Simon F. Eskildsen; D. Louis Collins (STIA, 2012)

Simultaneous segmentation and grading of anatomical structures for patient's classification: Application to Alzheimer's disease. - Pierrick Coupé; Simon F. Eskildsen; José V. Manjón; Vladimir S. Fonov; D. Louis Collins (NeuroImage, 2012)

BEaST: Brain extraction based on nonlocal segmentation technique. - Simon F. Eskildsen; Pierrick Coupé; Vladimir S. Fonov; José V. Manjón; Kelvin K. Leung; Nicolas Guizard; Shafik N. Wassef; Lasse Riis Østergaard; D. Louis Collins (NeuroImage, 2012)

A new method for structural volume analysis of longitudinal brain MRI data and its application in studying the growth trajectories of anatomical brain structures in childhood. - Bérengère Aubert-Broche; Vladimir S. Fonov; Daniel García-Lorenzo; Abderazzak Mouiha; Nicolas Guizard; Pierrick Coupé; Simon F. Eskildsen; D. Louis Collins (NeuroImage, 2013)

Prediction of Alzheimer's disease in subjects with mild cognitive impairment from the ADNI cohort using patterns of cortical thinning. - Simon F. Eskildsen; Pierrick Coupé; Daniel García-Lorenzo; Vladimir S. Fonov; Jens C. Pruessner; D. Louis Collins (NeuroImage, 2013)

Nonlocal Intracranial Cavity Extraction. - José V. Manjón; Simon F. Eskildsen; Pierrick Coupé; José E. Romero; D. Louis Collins; Montserrat Robles (Int. J. Biomed. Imaging, 2014)

Patch-Based Segmentation from MP2RAGE Images: Comparison to Conventional Techniques. - Erhard T. Næss-Schmidt; Anna Tietze; Irene K. Mikkelsen; Mikkel V. Petersen; Jakob Udby Blicher; Pierrick Coupé; José V. Manjón; Simon F. Eskildsen (Patch-MI@MICCAI, 2015)

Standardized evaluation of algorithms for computer-aided diagnosis of dementia based on structural MRI: The CADDementia challenge. - Esther E. Bron; Marion Smits; Wiesje M. van der Flier; Hugo Vrenken; Frederik Barkhof; Philip Scheltens; Janne M. Papma; Rebecca M. E. Steketee; Carolina Méndez Orellana; Rozanna Meijboom; Madalena Pinto; Joana R. Meireles; et al. (NeuroImage, 2015)

Automatic thalamus and hippocampus segmentation from MP2RAGE: comparison of publicly available methods and implications for DTI quantification. - Erhard T. Næss-Schmidt; Anna Tietze; Jakob Udby Blicher; Mikkel V. Petersen; Irene K. Mikkelsen; Pierrick Coupé; José V. Manjón; Simon F. Eskildsen (Int. J. Comput. Assist. Radiol. Surg., 2016)

Validation of structural brain connectivity networks: The impact of scanning parameters. - Karen Sandø Ambrosen; Simon F. Eskildsen; Max Hinne; Kristine Krug; Henrik Lundell; Mikkel N. Schmidt; Marcel A. J. van Gerven; Morten Mørup; Tim B. Dyrby (NeuroImage, 2020)

On the cortical connectivity in the macaque brain: A comparison of diffusion tractography and histological tracing data. - Gabriel Girard; Roberto Caminiti; Alexandra Battaglia-Mayer; Etienne St-Onge; Karen Sandø Ambrosen; Simon F. Eskildsen; Kristine Krug; Tim B. Dyrby; Maxime Descoteaux; Jean-Philippe Thiran; Giorgio M. Innocenti (NeuroImage, 2020)