Mobilizing a graduate school. - Simon Graham (SIGUCCS, 2001)

SAMS-NET: Stain-aware multi-scale network for instance-based nuclei segmentation in histology images. - Simon Graham; Nasir M. Rajpoot (ISBI, 2018)

Leveraging Unlabeled Whole-Slide-Images for Mitosis Detection. - Saad Ullah Akram; Talha Qaiser; Simon Graham; Juho Kannala; Janne Heikkilä; Nasir M. Rajpoot (COMPAY/OMIA@MICCAI, 2018)

Uncertainty Driven Pooling Network for Microvessel Segmentation in Routine Histology Images. - M. M. Fraz 001; Muhammad Shaban; Simon Graham; Syed Ali Khurram; Nasir M. Rajpoot (COMPAY/OMIA@MICCAI, 2018)

Classification of lung cancer histology images using patch-level summary statistics. - Simon Graham; Muhammad Shaban; Talha Qaiser; Syed Ali Khurram; Nasir M. Rajpoot (Digital Pathology, 2018)

MILD-Net: Minimal Information Loss Dilated Network for Gland Instance Segmentation in Colon Histology Images. - Simon Graham; Hao Chen 011; Qi Dou 001; Pheng-Ann Heng; Nasir M. Rajpoot (CoRR, 2018)

Predicting breast tumor proliferation from whole-slide images: the TUPAC16 challenge. - Mitko Veta; Yujing J. Heng; Nikolas Stathonikos; Babak Ehteshami Bejnordi; Francisco Beca; Thomas Wollmann; Karl Rohr; Manan A. Shah; Dayong Wang; Mikaël Rousson; Martin Hedlund; David Tellez; et al. (CoRR, 2018)

Methods for Segmentation and Classification of Digital Microscopy Tissue Images. - Quoc Dang Vu; Simon Graham; Minh Nguyen Nhat To; Muhammad Shaban; Talha Qaiser; Navid Alemi Koohbanani; Syed Ali Khurram; Tahsin M. Kurç; Keyvan Farahani; Tianhao Zhao; Rajarsi R. Gupta; Jin Tae Kwak; et al. (CoRR, 2018)

XY Network for Nuclear Segmentation in Multi-Tissue Histology Images. - Simon Graham; Quoc Dang Vu; Shan E Ahmed Raza; Jin Tae Kwak; Nasir M. Rajpoot (CoRR, 2018)

Rota-Net: Rotation Equivariant Network for Simultaneous Gland and Lumen Segmentation in Colon Histology Images. - Simon Graham; David B. A. Epstein; Nasir M. Rajpoot (ECDP, 2019)

CGC-Net: Cell Graph Convolutional Network for Grading of Colorectal Cancer Histology Images. - Yanning Zhou 001; Simon Graham; Navid Alemi Koohbanani; Muhammad Shaban; Pheng-Ann Heng; Nasir M. Rajpoot (ICCV Workshops, 2019)

MILD-Net: Minimal information loss dilated network for gland instance segmentation in colon histology images. - Simon Graham; Hao Chen 011; Jevgenij Gamper; Qi Dou 001; Pheng-Ann Heng; David R. J. Snead; Yee-Wah Tsang; Nasir M. Rajpoot (Medical Image Anal., 2019)

Hover-Net: Simultaneous segmentation and classification of nuclei in multi-tissue histology images. - Simon Graham; Quoc Dang Vu; Shan E Ahmed Raza; Ayesha Azam; Yee-Wah Tsang; Jin Tae Kwak; Nasir M. Rajpoot (Medical Image Anal., 2019)

Micro-Net: A unified model for segmentation of various objects in microscopy images. - Shan E Ahmed Raza; Linda Cheung; Muhammad Shaban; Simon Graham; David B. A. Epstein; Stella Pelengaris; Michael Khan; Nasir M. Rajpoot (Medical Image Anal., 2019)

Fast ScanNet: Fast and Dense Analysis of Multi-Gigapixel Whole-Slide Images for Cancer Metastasis Detection. - Huangjing Lin; Hao Chen 011; Simon Graham; Qi Dou 001; Nasir M. Rajpoot; Pheng-Ann Heng (IEEE Trans. Medical Imaging, 2019)

Capturing Cellular Topology in Multi-Gigapixel Pathology Images. - Wenqi Lu 001; Simon Graham; Mohsin Bilal; Nasir M. Rajpoot; Fayyaz A. Minhas (CVPR Workshops, 2020)

PanNuke Dataset Extension, Insights and Baselines. - Jevgenij Gamper; Navid Alemi Koohbanani; Simon Graham; Mostafa Jahanifar; Syed Ali Khurram; Ayesha Azam; Katherine Hewitt; Nasir M. Rajpoot (CoRR, 2020)

SAFRON: Stitching Across the Frontier for Generating Colorectal Cancer Histology Images. - Srijay Deshpande; Fayyaz A. Minhas; Simon Graham; Nasir M. Rajpoot (CoRR, 2020)

FABnet: feature attention-based network for simultaneous segmentation of microvessels and nerves in routine histology images of oral cancer. - M. M. Fraz 001; Syed Ali Khurram; Simon Graham; Muhammad Shaban; Mariam Hassan; Asif Loya; Nasir M. Rajpoot (Neural Comput. Appl., 2020)

Dense Steerable Filter CNNs for Exploiting Rotational Symmetry in Histology Images. - Simon Graham; David B. A. Epstein; Nasir M. Rajpoot (IEEE Trans. Medical Imaging, 2020)

A Multi-Organ Nucleus Segmentation Challenge. - Neeraj Kumar 002; Ruchika Verma; Deepak Anand; Yanning Zhou 001; Omer Fahri Onder; Efstratios Tsougenis; Hao Chen 011; Pheng-Ann Heng; Jiahui Li 005; Zhiqiang Hu; Yunzhi Wang; Navid Alemi Koohbanani; et al. (IEEE Trans. Medical Imaging, 2020)

Localisation and symmetry in computational pathology. - Simon Graham (2020)

Lizard: A Large-Scale Dataset for Colonic Nuclear Instance Segmentation and Classification. - Simon Graham; Mostafa Jahanifar; Ayesha Azam; Mohammed Nimir; Yee-Wah Tsang; Katherine Dodd; Emily Hero; Harvir Sahota; Atisha Tank; Ksenija Benes; Noorul Wahab; Fayyaz A. Minhas; et al. (ICCVW, 2021)

Simultaneous Nuclear Instance and Layer Segmentation in Oral Epithelial Dysplasia. - Adam J. Shephard; Simon Graham; Raja Muhammad Saad Bashir; Mostafa Jahanifar; Hanya Mahmood; Syed Ali Khurram; Nasir M. Rajpoot (ICCVW, 2021)

Semantic annotation for computational pathology: Multidisciplinary experience and best practice recommendations. - Noor ul Wahab; Islam M. Miligy; Katherine Dodd; Harvir Sahota; Michael Toss; Wenqi Lu 001; Mostafa Jahanifar; Mohsin Bilal; Simon Graham; Young Park; Giorgos Hadjigeorghiou; Abhir Bhalerao; et al. (CoRR, 2021)

CoNIC: Colon Nuclei Identification and Counting Challenge 2022. - Simon Graham; Mostafa Jahanifar; Quoc Dang Vu; Giorgos Hadjigeorghiou; Thomas Leech; David R. J. Snead; Shan E Ahmed Raza; Fayyaz A. Minhas; Nasir M. Rajpoot (CoRR, 2021)

MoNuSAC2020: A Multi-Organ Nuclei Segmentation and Classification Challenge. - Ruchika Verma; Neeraj Kumar 002; Abhijeet Patil; Nikhil Cherian Kurian; Swapnil Rane; Simon Graham; Quoc Dang Vu; Mieke Zwager; Shan-E-Ahmed Raza; Nasir M. Rajpoot; Xiyi Wu; Huai Chen; et al. (IEEE Trans. Medical Imaging, 2021)

TIAToolbox: An End-to-End Toolbox for Advanced Tissue Image Analytics. - John Pocock; Simon Graham; Quoc Dang Vu; Mostafa Jahanifar; Srijay Deshpande; Giorgos Hadjigeorghiou; Adam Shephard; Raja Muhammad Saad Bashir; Mohsin Bilal; Wenqi Lu 001; David B. A. Epstein; Fayyaz Minhas; et al. (Zenodo, 2021)

IMPaSh: A Novel Domain-Shift Resistant Representation for Colorectal Cancer Tissue Classification. - Trinh Thi Le Vuong; Quoc Dang Vu; Mostafa Jahanifar; Simon Graham; Jin Tae Kwak; Nasir M. Rajpoot (ECCV Workshops (3), 2022)

Neural Graph Modelling of Whole Slide Images for Survival Ranking. - Callum Christopher Mackenzie; Muhammad Dawood; Simon Graham; Mark Eastwood; Fayyaz ul Amir Afsar Minhas (LoG, 2022)

Nuclear Segmentation and Classification: On Color and Compression Generalization. - Quoc Dang Vu; Robert Jewsbury; Simon Graham; Mostafa Jahanifar; Shan-E-Ahmed Raza; Fayyaz Minhas; Abhir Bhalerao; Nasir M. Rajpoot (MLMI@MICCAI, 2022)

One Model is All You Need: Multi-Task Learning Enables Simultaneous Histology Image Segmentation and Classification. - Simon Graham; Quoc Dang Vu; Mostafa Jahanifar; Fayyaz A. Minhas; David R. J. Snead; Nasir M. Rajpoot (CoRR, 2022)

TIAger: Tumor-Infiltrating Lymphocyte Scoring in Breast Cancer for the TiGER Challenge. - Adam J. Shephard; Mostafa Jahanifar; Ruoyu Wang 027; Muhammad Dawood; Simon Graham; Kastytis Sidlauskas; Syed Ali Khurram; Nasir M. Rajpoot; Shan E Ahmed Raza (CoRR, 2022)

DigestPath: A benchmark dataset with challenge review for the pathological detection and segmentation of digestive-system. - Qian Da; Xiaodi Huang; Zhongyu Li 002; Yanfei Zuo; Chenbin Zhang; Jingxin Liu; Wen Chen 001; Jiahui Li 005; Dou Xu; Zhiqiang Hu; Hongmei Yi; Yan Guo; et al. (Medical Image Anal., 2022)

SAFRON: Stitching Across the Frontier Network for Generating Colorectal Cancer Histology Images. - Srijay Deshpande; Fayyaz A. Minhas; Simon Graham; Nasir M. Rajpoot (Medical Image Anal., 2022)

TIAToolbox: An End-to-End Toolbox for Advanced Tissue Image Analytics. - John Pocock; Simon Graham; Quoc Dang Vu; Mostafa Jahanifar; Srijay Deshpande; Giorgos Hadjigeorghiou; Adam Shephard; Raja Muhammad Saad Bashir; Mohsin Bilal; Wenqi Lu 001; David B. A. Epstein; Fayyaz Minhas; et al. (Zenodo, 2022)

TIAToolbox: An End-to-End Toolbox for Advanced Tissue Image Analytics. - John Pocock; Simon Graham; Quoc Dang Vu; Mostafa Jahanifar; Srijay Deshpande; Giorgos Hadjigeorghiou; Adam Shephard; Raja Muhammad Saad Bashir; Mohsin Bilal; Wenqi Lu 001; David B. A. Epstein; Fayyaz Minhas; et al. (Zenodo, 2022)

TIAToolbox: An End-to-End Toolbox for Advanced Tissue Image Analytics. - John Pocock; Simon Graham; Quoc Dang Vu; Mostafa Jahanifar; Srijay Deshpande; Giorgos Hadjigeorghiou; Adam Shephard; Raja Muhammad Saad Bashir; Mohsin Bilal; Wenqi Lu 001; David B. A. Epstein; Fayyaz Minhas; et al. (Zenodo, 2022)

TIAToolbox: An End-to-End Toolbox for Advanced Tissue Image Analytics. - John Pocock; Simon Graham; Quoc Dang Vu; Mostafa Jahanifar; Srijay Deshpande; Giorgos Hadjigeorghiou; Adam Shephard; Raja Muhammad Saad Bashir; Mohsin Bilal; Wenqi Lu 001; David B. A. Epstein; Fayyaz Minhas; et al. (Zenodo, 2022)

TIAToolbox: An End-to-End Toolbox for Advanced Tissue Image Analytics. - John Pocock; Simon Graham; Quoc Dang Vu; Mostafa Jahanifar; Srijay Deshpande; Giorgos Hadjigeorghiou; Adam Shephard; Raja Muhammad Saad Bashir; Mohsin Bilal; Wenqi Lu 001; David B. A. Epstein; Fayyaz Minhas; et al. (Zenodo, 2022)

TIAToolbox: An End-to-End Toolbox for Advanced Tissue Image Analytics. - John Pocock; Simon Graham; Quoc Dang Vu; Mostafa Jahanifar; Srijay Deshpande; Giorgos Hadjigeorghiou; Adam Shephard; Raja Muhammad Saad Bashir; Mohsin Bilal; Wenqi Lu 001; David B. A. Epstein; Fayyaz Minhas; et al. (Zenodo, 2022)

TIAToolbox as an end-to-end library for advanced tissue image analytics. - John Pocock; Simon Graham; Quoc Dang Vu; Mostafa Jahanifar; Srijay Deshpande; Giorgos Hadjigeorghiou; Adam Shephard; Raja Muhammad Saad Bashir; Mohsin Bilal; Wenqi Lu 001; David B. A. Epstein; Fayyaz Minhas; et al. (Zenodo, 2022)

TIAToolbox as an end-to-end library for advanced tissue image analytics. - John Pocock; Simon Graham; Quoc Dang Vu; Mostafa Jahanifar; Srijay Deshpande; Giorgos Hadjigeorghiou; Adam Shephard; Raja Muhammad Saad Bashir; Mohsin Bilal; Wenqi Lu 001; David B. A. Epstein; Fayyaz Minhas; et al. (Zenodo, 2022)

Accurate segmentation of nuclear instances using a double-stage neural network. - Kesi Xu; Mostafa Jahanifar; Simon Graham; Nasir M. Rajpoot (Digital and Computational Pathology, 2023)

Nuclear Segmentation and Classification: On Color & Compression Generalization. - Quoc Dang Vu; Robert Jewsbury; Simon Graham; Mostafa Jahanifar; Shan E Ahmed Raza; Fayyaz Minhas; Abhir Bhalerao; Nasir M. Rajpoot (CoRR, 2023)

LYSTO: The Lymphocyte Assessment Hackathon and Benchmark Dataset. - Yiping Jiao; Jeroen van der Laak; Shadi Albarqouni; Zhang Li; Tao Tan; Abhir Bhalerao; Jiabo Ma; Jiamei Sun; Johnathon Pocock; Josien P. W. Pluim; Navid Alemi Koohbanani; Raja Muhammad Saad Bashir; et al. (CoRR, 2023)

CoNIC Challenge: Pushing the Frontiers of Nuclear Detection, Segmentation, Classification and Counting. - Simon Graham; Quoc Dang Vu; Mostafa Jahanifar; Martin Weigert 001; Uwe Schmidt; Wenhua Zhang; Jun Zhang 018; Sen Yang 006; Jinxi Xiang; Xiyue Wang; Josef Lorenz Rumberger; Elias Baumann; et al. (CoRR, 2023)

One model is all you need: Multi-task learning enables simultaneous histology image segmentation and classification. - Simon Graham; Quoc Dang Vu; Mostafa Jahanifar; Shan-E-Ahmed Raza; Fayyaz A. Afsar; David R. J. Snead; Nasir M. Rajpoot (Medical Image Anal., 2023)

TIAToolbox as an end-to-end library for advanced tissue image analytics. - John Pocock; Simon Graham; Quoc Dang Vu; Mostafa Jahanifar; Srijay Deshpande; Giorgos Hadjigeorghiou; Adam Shephard; Raja Muhammad Saad Bashir; Mohsin Bilal; Wenqi Lu 001; David B. A. Epstein; Fayyaz Minhas; et al. (Zenodo, 2023)

TIAToolbox as an end-to-end library for advanced tissue image analytics. - John Pocock; Simon Graham; Quoc Dang Vu; Mostafa Jahanifar; Srijay Deshpande; Giorgos Hadjigeorghiou; Adam Shephard; Raja Muhammad Saad Bashir; Mohsin Bilal; Wenqi Lu 001; David B. A. Epstein; Fayyaz Minhas; et al. (Zenodo, 2023)

TIAToolbox as an end-to-end library for advanced tissue image analytics. - John Pocock; Simon Graham; Quoc Dang Vu; Mostafa Jahanifar; Srijay Deshpande; Giorgos Hadjigeorghiou; Adam Shephard; Raja Muhammad Saad Bashir; Mohsin Bilal; Wenqi Lu 001; David B. A. Epstein; Fayyaz Minhas; et al. (Zenodo, 2023)

TIAToolbox as an end-to-end library for advanced tissue image analytics. - John Pocock; Simon Graham; Quoc Dang Vu; Mostafa Jahanifar; Srijay Deshpande; Giorgos Hadjigeorghiou; Adam Shephard; Raja Muhammad Saad Bashir; Mohsin Bilal; Wenqi Lu 001; David B. A. Epstein; Fayyaz Minhas; et al. (Zenodo, 2023)

An Automated Pipeline for Tumour-Infiltrating Lymphocyte Scoring in Breast Cancer. - Adam J. Shephard; Mostafa Jahanifar; Ruoyu Wang 027; Muhammad Dawood; Simon Graham; Kastytis Sidlauskas; Syed Ali Khurram; Nasir M. Rajpoot; Shan E Ahmed Raza (ISBI, 2024)

HoverFast: an accurate, high-throughput, clinically deployable nuclear segmentation tool for brightfield digital pathology images. - Petros Liakopoulos; Julien Massonnet; Jonatan Bonjour; Medya Tekes Mizrakli; Simon Graham; Michel A. Cuendet; Amanda H. Seipel; Olivier Michielin; Doron Merkler; Andrew Janowczyk (J. Open Source Softw., 2024)

Mitosis detection, fast and slow: Robust and efficient detection of mitotic figures. - Mostafa Jahanifar; Adam Shephard; Neda Zamanitajeddin; Simon Graham; Shan E Ahmed Raza; Fayyaz Minhas; Nasir M. Rajpoot (Medical Image Anal., 2024)

CoNIC Challenge: Pushing the frontiers of nuclear detection, segmentation, classification and counting. - Simon Graham; Quoc Dang Vu; Mostafa Jahanifar; Martin Weigert 001; Uwe Schmidt; Wenhua Zhang; Jun Zhang 018; Sen Yang 006; Jinxi Xiang; Xiyue Wang; Josef Lorenz Rumberger; Elias Baumann; et al. (Medical Image Anal., 2024)

LYSTO: The Lymphocyte Assessment Hackathon and Benchmark Dataset. - Yiping Jiao; Jeroen van der Laak; Shadi Albarqouni; Zhang Li; Tao Tan; Abhir Bhalerao; Shenghua Cheng; Jiabo Ma; John Pocock; Josien P. W. Pluim; Navid Alemi Koohbanani; Raja Muhammad Saad Bashir; et al. (IEEE J. Biomed. Health Informatics, 2024)

TIAToolbox as an end-to-end library for advanced tissue image analytics. - Johnathan Pocock; Simon Graham; Quoc Dang Vu; Mostafa Jahanifar; Srijay Deshpande; Giorgos Hadjigeorghiou; Adam Shephard; Raja Muhammad Saad Bashir; Mohsin Bilal; Wenqi Lu 001; David B. A. Epstein; Fayyaz Minhas; et al. (Zenodo, 2024)

The case for delegated AI autonomy for Human AI teaming in healthcare. - Yan Jia 008; Harriet Evans; Zoë Porter; Simon Graham; John A. McDermid; Tom Lawton; David R. J. Snead; Ibrahim Habli (CoRR, 2025)