Phonon Transport Simulator (PhonTS). - Aleksandr Chernatynskiy; Simon R. Phillpot (Comput. Phys. Commun., 2015)

Potential Optimization Software for Materials (POSMat). - Jackelyn A. Martinez; Aleksandr Chernatynskiy; Dundar E. Yilmaz; Tao Liang; Susan B. Sinnott; Simon R. Phillpot (Comput. Phys. Commun., 2016)

ACESO: A 3D Agent-Based Simulation of the Interaction Between Immune and Tumor Cells. - Alexander R. Webber; Simon R. Phillpot; Duy T. Nguyen; Eric O. McGhee; W. Gregory Sawyer; Paul D. Gader (SIGSIM-PADS, 2022)