Graph-Based Decomposition of Biochemical Reaction Networks into Monotone Subsystems. - Hans-Michael Kaltenbach; Simona Constantinescu; Justin Feigelman; Jörg Stelling (WABI, 2011)

TiMEx: a waiting time model for mutually exclusive cancer alterations. - Simona Constantinescu; Ewa Szczurek; Pejman Mohammadi 001; Jörg Rahnenführer; Niko Beerenwinkel (Bioinform., 2016)