Haplotype Assembly Using Manifold Optimization and Error Correction Mechanism. - Mohamad Mahdi Mohades; Sina Majidian; Mohammad Hossein Kahaei (IEEE Signal Process. Lett., 2019)

Hap10: reconstructing accurate and long polyploid haplotypes using linked reads. - Sina Majidian; Mohammad Hossein Kahaei; Dick de Ridder (BMC Bioinform., 2020)

Matrix Completion Using Graph Total Variation Based on Directed Laplacian Matrix. - Alireza Ahmadi; Sina Majidian; Mohammad Hossein Kahaei (Circuits Syst. Signal Process., 2021)

Matrix completion with weighted constraint for haplotype estimation. - Sina Majidian; Mohamad Mahdi Mohades; Mohammad Hossein Kahaei (Digit. Signal Process., 2021)

OMAMO: orthology-based alternative model organism selection. - Alina Nicheperovich; Adrian M. Altenhoff; Christophe Dessimoz; Sina Majidian (Bioinform., 2022)

Towards predicting essential proteins via federated SPARQL queries. - Petros Liakopoulous; Borbala Banfalvi; Xinyi Wang; Sina Majidian; Tarcisio Mendes de Farias; Christophe Dessimoz; Ana Claudia Sima (SWAT4HCLS, 2023)

EvANI benchmarking workflow for evolutionary distance estimation. - Sina Majidian; Stephen Hwang; Mohsen Zakeri; Ben Langmead (Briefings Bioinform., 2025)