Phylogenetic analysis of modularity in protein interaction networks. - Sinan Erten; Xin Li 130; Gürkan Bebek; Jing Li 002; Mehmet Koyutürk (BMC Bioinform., 2009)

Role of Centrality in Network-Based Prioritization of Disease Genes. - Sinan Erten; Mehmet Koyutürk (EvoBIO, 2010)

Disease Gene Prioritization Based on Topological Similarity in Protein-Protein Interaction Networks. - Sinan Erten; Gürkan Bebek; Mehmet Koyutürk (RECOMB, 2011)

DADA: Degree-Aware Algorithms for Network-Based Disease Gene Prioritization. - Sinan Erten; Gürkan Bebek; Rob M. Ewing; Mehmet Koyutürk (BioData Min., 2011)

Vavien: An Algorithm for Prioritizing Candidate Disease Genes Based on Topological Similarity of Proteins in Interaction Networks. - Sinan Erten; Gürkan Bebek; Mehmet Koyutürk (J. Comput. Biol., 2011)

Algorithms for detecting complementary SNPs within a region of interest that are associated with diseases. - Sinan Erten; Marzieh Ayati; Yu Liu 093; Mark R. Chance; Mehmet Koyutürk (BCB, 2012)

What Do We Learn from Network-Based Analysis of Genome-Wide Association Data? - Marzieh Ayati; Sinan Erten; Mehmet Koyutürk (EvoApplications, 2014)

MOBAS: identification of disease-associated protein subnetworks using modularity-based scoring. - Marzieh Ayati; Sinan Erten; Mark R. Chance; Mehmet Koyutürk (EURASIP J. Bioinform. Syst. Biol., 2015)