Highly conserved and associated HIV-1 CTL and T-Helper epitopes in global HIV-1 population: potential candidates for multi-epitope HIV-1 vaccine. - Sinu Paul; Helen Piontkivska (BCB, 2010)

Development and validation of a broad scheme for prediction of HLA class II restricted T cell epitopes. - Sinu Paul; John Sidney; Bjoern Peters; Alessandro Sette (BCB, 2014)

Role of ADAR in determining the substitution pattern in sigma virus (Rhabdoviridae) in Drosophila melanogaster. - Helen Piontkivska; Sinu Paul; Brian Scharfenberg; Marta Wayne; Luis F. Matos; William G. Farmerie; Michael M. Miyamoto (ICCABS, 2014)

IEDB-AR: immune epitope database - analysis resource in 2019. - Sandeep Kumar Dhanda; Swapnil Mahajan; Sinu Paul; Zhen Yan; Haeuk Kim; Martin Closter Jespersen; Vanessa Isabell Jurtz; Massimo Andreatta; Jason A. Greenbaum; Paolo Marcatili; Alessandro Sette; Morten Nielsen 001; et al. (Nucleic Acids Res., 2019)

NetMHCpan-4.1 and NetMHCIIpan-4.0: improved predictions of MHC antigen presentation by concurrent motif deconvolution and integration of MS MHC eluted ligand data. - Birkir Reynisson; Bruno Alvarez; Sinu Paul; Bjoern Peters; Morten Nielsen 001 (Nucleic Acids Res., 2020)

Benchmarking predictions of MHC class I restricted T cell epitopes in a comprehensively studied model system. - Sinu Paul; Nathan P. Croft; Anthony W. Purcell; David C. Tscharke; Alessandro Sette; Morten Nielsen 001; Bjoern Peters (PLoS Comput. Biol., 2020)