SEK: sparsity exploiting k-mer-based estimation of bacterial community composition. - Saikat Chatterjee; David Koslicki; Siyuan Dong; Nicolas Innocenti; Lu Cheng 004; Yueheng Lan; Mikko Vehkaperä; Mikael Skoglund; Lars K. Rasmussen; Erik Aurell; Jukka Corander (Bioinform., 2014)

Connecting Look and Feel: Associating the Visual and Tactile Properties of Physical Materials. - Wenzhen Yuan 001; Shaoxiong Wang; Siyuan Dong; Edward H. Adelson (CVPR, 2017)

Improved GelSight tactile sensor for measuring geometry and slip. - Siyuan Dong; Wenzhen Yuan 001; Edward H. Adelson (IROS, 2017)

GelSight: High-Resolution Robot Tactile Sensors for Estimating Geometry and Force. - Wenzhen Yuan 001; Siyuan Dong; Edward H. Adelson (Sensors, 2017)

Slip Detection with Combined Tactile and Visual Information. - Jianhua Li; Siyuan Dong; Edward H. Adelson (ICRA, 2018)

GelSlim: A High-Resolution, Compact, Robust, and Calibrated Tactile-sensing Finger. - Elliott Donlon; Siyuan Dong; Melody Liu; Jianhua Li; Edward H. Adelson; Alberto Rodriguez 003 (IROS, 2018)

End-to-end pixelwise surface normal estimation with convolutional neural networks and shape reconstruction using GelSight sensor. - Jianhua Li; Siyuan Dong; Edward H. Adelson (ROBIO, 2018)

Dense Tactile Force Distribution Estimation using GelSlim and inverse FEM. - Daolin Ma; Elliott Donlon; Siyuan Dong; Alberto Rodriguez 003 (CoRR, 2018)

Maintaining Grasps within Slipping Bound by Monitoring Incipient Slip. - Siyuan Dong; Daolin Ma; Elliott Donlon; Alberto Rodriguez 003 (CoRR, 2018)

Maintaining Grasps within Slipping Bounds by Monitoring Incipient Slip. - Siyuan Dong; Daolin Ma; Elliott Donlon; Alberto Rodriguez 003 (ICRA, 2019)

Dense Tactile Force Estimation using GelSlim and inverse FEM. - Daolin Ma; Elliott Donlon; Siyuan Dong; Alberto Rodriguez 003 (ICRA, 2019)

Tactile-Based Insertion for Dense Box-Packing. - Siyuan Dong; Alberto Rodriguez 003 (IROS, 2019)

Tactile Dexterity: Manipulation Primitives with Tactile Feedback. - François Robert Hogan; José Ballester; Siyuan Dong; Alberto Rodriguez 003 (ICRA, 2020)

High-Resolution Magnetic Resonance Spectroscopic Imaging using a Multi-Encoder Attention U-Net with Structural and Adversarial Loss. - Siyuan Dong; Gilbert Hangel; Wolfgang Bogner; Siegfried Trattnig; Karl Rössler; Georg Widhalm; Henk M. De Feyter; Robin A. de Graaf; James S. Duncan (EMBC, 2021)

Tactile-RL for Insertion: Generalization to Objects of Unknown Geometry. - Siyuan Dong; Devesh K. Jha; Diego Romeres; Sangwoon Kim; Daniel Nikovski; Alberto Rodriguez 003 (ICRA, 2021)

Extrinsic Contact Sensing with Relative-Motion Tracking from Distributed Tactile Measurements. - Daolin Ma; Siyuan Dong; Alberto Rodriguez 003 (ICRA, 2021)

GelSlim3.0: High-Resolution Measurement of Shape, Force and Slip in a Compact Tactile-Sensing Finger. - Ian H. Taylor; Siyuan Dong; Alberto Rodriguez 003 (CoRR, 2021)

A Review on Cybersecurity in Smart Local Energy Systems: Requirements, Challenges, and Standards. - Siyuan Dong; Jun Cao; Zhong Fan (CoRR, 2021)

Cable manipulation with a tactile-reactive gripper. - Yu She; Shaoxiong Wang; Siyuan Dong; Neha Sunil; Alberto Rodriguez 003; Edward H. Adelson (Int. J. Robotics Res., 2021)

GelSlim 3.0: High-Resolution Measurement of Shape, Force and Slip in a Compact Tactile-Sensing Finger. - Ian H. Taylor; Siyuan Dong; Alberto Rodriguez 003 (ICRA, 2022)

Visual-Tactile Multimodality for Following Deformable Linear Objects Using Reinforcement Learning. - Leszek Pecyna; Siyuan Dong; Shan Luo 001 (IROS, 2022)

Invertible Sharpening Network for MRI Reconstruction Enhancement. - Siyuan Dong; Eric Z. Chen; Lin Zhao 004; Xiao Chen 013; Yikang Liu 001; Terrence Chen; Shanhui Sun (MICCAI (6), 2022)

Multi-scale Super-Resolution Magnetic Resonance Spectroscopic Imaging with Adjustable Sharpness. - Siyuan Dong; Gilbert Hangel; Wolfgang Bogner; Georg Widhalm; Karl Rössler; Siegfried Trattnig; Chenyu You; Robin A. de Graaf; John A. Onofrey; James S. Duncan (MICCAI (6), 2022)

Flow-Based Visual Quality Enhancer for Super-Resolution Magnetic Resonance Spectroscopic Imaging. - Siyuan Dong; Gilbert Hangel; Eric Z. Chen; Shanhui Sun; Wolfgang Bogner; Georg Widhalm; Chenyu You; John A. Onofrey; Robin A. de Graaf; James S. Duncan (DGM4MICCAI@MICCAI, 2022)

Incremental Learning Meets Transfer Learning: Application to Multi-site Prostate MRI Segmentation. - Chenyu You; Jinlin Xiang; Kun Su; Xiaoran Zhang; Siyuan Dong; John A. Onofrey; Lawrence H. Staib; James S. Duncan (DeCaF/FAIR@MICCAI, 2022)

Class-Aware Adversarial Transformers for Medical Image Segmentation. - Chenyu You; Ruihan Zhao 001; Fenglin Liu; Siyuan Dong; Sandeep Chinchali; Ufuk Topcu; Lawrence H. Staib; James S. Duncan (NeurIPS, 2022)

Cyber-physical components of an autonomous and scalable SLES. - Nandor Verba; Pablo R. Baldivieso Monasterios; Siyuan Dong; Andrei-Constantin Braitor; George C. Konstantopoulos; Elena I. Gaura; Euan A. Morris; Alison Halford; Colin Stephen (CoRR, 2022)

Cybersecurity in smart local energy systems: requirements, challenges, and standards. - Siyuan Dong; Jun Cao; David Flynn; Zhong Fan (Energy Inform., 2022)

Unsupervised Domain Adaptation by Cross-Prototype Contrastive Learning for Medical Image Segmentation. - Zhuotong Cai; Jingmin Xin; Siyuan Dong; Chenyu You; Peiwen Shi; Tianyi Zeng; Jiazhen Zhang; John A. Onofrey; Nanning Zheng 001; James S. Duncan (BIBM, 2023)

KVSAgg: Secure Aggregation of Distributed Key-Value Sets. - Yuhan Wu 001; Siyuan Dong; Yi Zhou; Yikai Zhao 001; Fangcheng Fu; Tong Yang 003; Chaoyue Niu; Fan Wu 006; Bin Cui 001 (ICDE, 2023)

Neural Contact Fields: Tracking Extrinsic Contact with Tactile Sensing. - Carolina Higuera; Siyuan Dong; Byron Boots; Mustafa Mukadam (ICRA, 2023)

MicroscopeSketch: Accurate Sliding Estimation Using Adaptive Zooming. - Yuhan Wu 001; Shiqi Jiang; Siyuan Dong; Zheng Zhong; Jiale Chen 003; Yutong Hu 002; Tong Yang 003; Steve Uhlig; Bin Cui 001 (KDD, 2023)

Comverse: A Federative-by-Design Platform for Community Computing. - Silvery Fu; Dylan Reimer; Siyuan Dong; Yifei Zhu 001; Sylvia Ratnasamy (CoRR, 2023)

Preserved Edge Convolutional Neural Network for Sensitivity Enhancement of Deuterium Metabolic Imaging (DMI). - Siyuan Dong; Henk M. De Feyter; Monique A. Thomas; Robin A. de Graaf; James S. Duncan (CoRR, 2023)

Jut: A Framework for Just-in-Time Data Access. - Silvery Fu; Siyuan Dong; Jamsheed Mistri; Steven McCanne; Amy Ousterhout; Sylvia Ratnasamy (CoRR, 2023)

3-D Gravity Data Inversion Based on Enhanced Dual U-Net Framework. - Siyuan Dong; Jian Jiao; Shuai Zhou; Pengyu Lu; Zhaofa Zeng (IEEE Trans. Geosci. Remote. Sens., 2023)

HoppingSketch: More Accurate Temporal Membership Query and Frequency Query. - Zhuochen Fan; Yubo Zhang; Siyuan Dong; Yi Zhou; Fangyi Liu; Tong Yang 003; Steve Uhlig; Bin Cui 001 (IEEE Trans. Knowl. Data Eng., 2023)

Improved Gravity Inversion Method Based on Deep Learning with Physical Constraint and Its Application to the Airborne Gravity Data in East Antarctica. - Guochao Wu; Yue Wei; Siyuan Dong; Tao Zhang 039; Chunguo Yang; Linjiang Qin; Qingsheng Guan (Remote. Sens., 2023)

Symmetric Consistency with Cross-Domain Mixup for Cross-Modality Cardiac Segmentation. - Zhuotong Cai; Jingmin Xin; Siyuan Dong; John A. Onofrey; Nanning Zheng 001; James S. Duncan (ICASSP, 2024)

M4: A Framework for Per-Flow Quantile Estimation. - Siyuan Dong; Zhuochen Fan; Tianyu Bai; Tong Yang 003; Hanyu Xue; Peiqing Chen; Yuhan Wu 001 (ICDE, 2024)

Class-Aware Mutual Mixup with Triple Alignments for Semi-supervised Cross-Domain Segmentation. - Zhuotong Cai; Jingmin Xin; Tianyi Zeng; Siyuan Dong; Nanning Zheng 001; James S. Duncan (MICCAI (8), 2024)

3-D Gravity and Magnetic Joint Inversion Based on Deep Learning Combined With Measurement Data Constraint. - Jian Jiao; Siyuan Dong; Shuai Zhou; Zhaofa Zeng; Tao Lin (IEEE Trans. Geosci. Remote. Sens., 2024)

Magnetic Data Edge Detection Method With Depth Information Based on UNet ++. - Shuai Zhou; Xiuan Yao; Xiangcheng Zeng; Siyuan Dong; Zhenyu Yu (IEEE Trans. Geosci. Remote. Sens., 2024)

Unbiased Real-Time Traffic Sketching. - Yuhan Wu 001; Shiqi Jiang; Yifei Xu; Siyuan Dong; Kaicheng Yang 001; Peiqing Chen; Tong Yang 003 (IEEE Trans. Netw. Sci. Eng., 2024)

Style mixup enhanced disentanglement learning for unsupervised domain adaptation in medical image segmentation. - Zhuotong Cai; Jingmin Xin; Chenyu You; Peiwen Shi; Siyuan Dong; Nicha C. Dvornek; Nanning Zheng 001; James S. Duncan (Medical Image Anal., 2025)

A Flow-based Truncated Denoising Diffusion Model for super-resolution Magnetic Resonance Spectroscopic Imaging. - Siyuan Dong; Zhuotong Cai; Gilbert Hangel; Wolfgang Bogner; Georg Widhalm; Yaqing Huang; Qinghao Liang; Chenyu You; Chathura Kumaragamage; Robert K. Fulbright; Amit Mahajan; Amin Karbasi; et al. (Medical Image Anal., 2025)

PTDA: Progressive Pseudo-Label Learning for Cross-Domain Cloud Detection in High-Resolution Remote Sensing. - Jin Kuang; Xianjun Gao; Yuanwei Yang; Siyuan Dong; Ji Dong; Yuan Kou; Meilin Tan; Zhiwei Wang (IEEE Trans. Geosci. Remote. Sens., 2025)

Detecting Flow Gaps in Data Streams. - Siyuan Dong; Yuxuan Tian; Wenhan Ma; Tong Yang 003; Chenye Zhang; Yuhan Wu 001; Kaicheng Yang 001; Yaojing Wang (CoRR, 2025)

Per-Flow Quantile Estimation Using M4 Framework. - Zhuochen Fan; Yalun Cai; Siyuan Dong; Qiuheng Yin; Tianyu Bai; Hanyu Xue; Peiqing Chen; Yuhan Wu 001; Tong Yang 003; Bin Cui 001 (IEEE Trans. Knowl. Data Eng., 2025)