Outlier Gene Set Analysis Combined with Top Scoring Pair Provides Robust Biomarkers of Pathway Activity. - Michael F. Ochs; Jason E. Farrar; Michael Considine; Yingying Wei; Soheil Meschinchi; Robert J. Arceci (PRIB, 2013)

Outlier Analysis and Top Scoring Pairfor Integrated Data Analysisand Biomarker Discovery. - Michael F. Ochs; Jason E. Farrar; Michael Considine; Yingying Wei; Soheil Meshinchi; Robert J. Arceci (IEEE ACM Trans. Comput. Biol. Bioinform., 2014)

Pan-cancer genome and transcriptome analyses of 1, 699 paediatric leukaemias and solid tumours. - Xiaotu Ma; Yu Liu; Yanling Liu; Ludmil B. Alexandrov; Michael N. Edmonson; Charles Gawad; Xin Zhou; Yongjin Li; Michael Rusch; John Easton; Robert Huether; Veronica Gonzalez-Pena; et al. (Nat., 2018)

RNAIndel: discovering somatic coding indels from tumor RNA-Seq data. - Kohei Hagiwara; Liang Ding; Michael N. Edmonson; Stephen V. Rice; Scott Newman; John Easton; Juncheng Dai; Soheil Meshinchi; Rhonda E. Ries; Michael Rusch; Jinghui Zhang (Bioinform., 2020)

PATH-SURVEYOR: pathway level survival enquiry for immuno-oncology and drug repurposing. - Alyssa N. Obermayer; Darwin Chang; Gabrielle Nobles; Mingxiang Teng; Aik Choon Tan; Xuefeng Wang; Y. Ann Chen; Steven Eschrich; Paulo C. Rodriguez; G. Daniel Grass; Soheil Meshinchi; Ahmad Tarhini; et al. (BMC Bioinform., 2023)