A computational genomics pipeline for prokaryotic sequencing projects. - Andrey Kislyuk; Lee S. Katz; Sonia Agrawal; Matthew S. Hagen; Andrew B. Conley; Pushkala Jayaraman; Viswateja Nelakuditi; Jay C. Humphrey; Scott A. Sammons; Dhwani Govil; Raydel D. Mair; Kathleen M. Tatti; et al. (Bioinform., 2010)

Neisseria Base: a comparative genomics database for Neisseria meningitidis. - Lee S. Katz; Jay C. Humphrey; Andrew B. Conley; Viswateja Nelakuditi; Andrey Kislyuk; Sonia Agrawal; Pushkala Jayaraman; Brian H. Harcourt; Melissa A. Olsen-Rasmussen; Michael Frace; Nitya V. Sharma; Leonard W. Mayer; et al. (Database J. Biol. Databases Curation, 2011)

Circleator: flexible circular visualization of genome-associated data with BioPerl and SVG. - Jonathan Crabtree; Sonia Agrawal; Anup Mahurkar; Garry S. A. Myers; David A. Rasko; Owen White (Bioinform., 2014)