Re-visiting protein-centric two-tier classification of existing DNA-protein complexes. - Sony Malhotra; Ramanathan Sowdhamini (BMC Bioinform., 2012)

DOCKSCORE: a webserver for ranking protein-protein docked poses. - Sony Malhotra; Oommen K. Mathew; Ramanathan Sowdhamini (BMC Bioinform., 2015)

TIBLE: a web-based, freely accessible resource for small-molecule binding data for mycobacterial species. - Sony Malhotra; Grace Mugumbate; Tom L. Blundell; Alicia P. Higueruelo (Database J. Biol. Databases Curation, 2017)

ProCarbDB: a database of carbohydrate-binding proteins. - Liviu Copoiu; Pedro H. M. Torres; David B. Ascher; Tom L. Blundell; Sony Malhotra (Nucleic Acids Res., 2020)