Vascular tree tracking and bifurcation points detection in retinal images using a hierarchical probabilistic model. - Soodeh Kalaie; Ali Gooya (Comput. Methods Programs Biomed., 2017)

A Geometric Deep Learning Framework for Generation of Virtual Left Ventricles as Graphs. - Soodeh Kalaie; Andrew J. Bulpitt; Alejandro F. Frangi; Ali Gooya (MIDL, 2023)

HeartMAE: Advancing Cardiac MRI Analysis through Optical Flow Guided Masked Autoencoding. - Vladislav Kim; Lisa Schneider; Soodeh Kalaie; Declan O'Regan; Christian Bender (ML4H@NeurIPS, 2024)

An End-to-End Deep Learning Generative Framework for Refinable Shape Matching and Generation. - Soodeh Kalaie; Andy Bulpitt; Alejandro F. Frangi; Ali Gooya (IEEE Trans. Medical Imaging, 2025)