Petri net-based prediction of therapeutic targets that recover abnormally phosphorylated proteins in muscle atrophy. - Jinmyung Jung; Mijin Kwon; Sunghwa Bae; Soorin Yim; Doheon Lee (BMC Syst. Biol., 2018)

Annotating activation/inhibition relationships to protein-protein interactions using gene ontology relations. - Soorin Yim; Hasun Yu; Dongjin Jang; Doheon Lee (BMC Syst. Biol., 2018)

CODA-ML: context-specific biological knowledge representation for systemic physiology analysis. - Mijin Kwon; Soorin Yim; Gwangmin Kim; Saehwan Lee; Chungsun Jeong; Doheon Lee (BMC Bioinform., 2019)

Identification and validation of Triamcinolone and Gallopamil as treatments for early COVID-19 via an in silico repurposing pipeline. - Méabh MacMahon; Woochang Hwang; Soorin Yim; Eoghan MacMahon; Alexandre Abraham; Justin Barton; Mukunthan Tharmakulasingam; Paul Bilokon; Vasanthi Priyadarshini Gaddi; Namshik Han (CoRR, 2021)

Multitask Extension of Geometrically Aligned Transfer Encoder. - Sung Moon Ko; Sumin Lee; Dae-Woong Jeong; Hyunseung Kim; Chanhui Lee; Soorin Yim; Sehui Han (CoRR, 2024)

Task Addition in Multi-Task Learning by Geometrical Alignment. - Soorin Yim; Dae-Woong Jeong; Sung Moon Ko; Sumin Lee; Hyunseung Kim; Chanhui Lee; Sehui Han (CoRR, 2024)

Scalable Multi-Task Transfer Learning for Molecular Property Prediction. - Chanhui Lee; Dae-Woong Jeong; Sung Moon Ko; Sumin Lee; Hyunseung Kim; Soorin Yim; Sehui Han; Sungwoong Kim; Sungbin Lim (CoRR, 2024)

Geometric Embedding Alignment via Curvature Matching in Transfer Learning. - Sung Moon Ko; Jaewan Lee; Sumin Lee; Soorin Yim; Kyunghoon Bae; Sehui Han (CoRR, 2025)