Random Multi-Channel Image Synthesis for Multiplexed Immunofluorescence Imaging. - Shunxing Bao; Yucheng Tang; Ho Hin Lee; Riqiang Gao; Sophie Chiron; Ilwoo Lyu; Lori A. Coburn; Keith T. Wilson; Joseph T. Roland; Bennett A. Landman; Yuankai Huo (COMPAY@MICCAI, 2021)

MxIF Q-score: Biology-Informed Quality Assurance for Multiplexed Immunofluorescence Imaging. - Shunxing Bao; Jia Li 027; Can Cui 006; Yucheng Tang; Ruining Deng; Lucas W. Remedios; Ho Hin Lee; Sophie Chiron; Nathan Heath Patterson; Ken S. Lau; Lori A. Coburn; Keith T. Wilson; et al. (MOVI@MICCAI, 2022)

Cross-Scale Attention Guided Multi-instance Learning for Crohn's Disease Diagnosis with Pathological Images. - Ruining Deng; Can Cui 006; Lucas W. Remedios; Shunxing Bao; R. Michael Womick; Sophie Chiron; Jia Li 027; Joseph T. Roland; Ken S. Lau; Qi Liu 024; Keith T. Wilson; Yaohong Wang; et al. (MMMI@MICCAI, 2022)

Inpainting missing tissue in multiplexed immunofluorescence imaging. - Shunxing Bao; Yucheng Tang; Ho Hin Lee; Riqiang Gao; Qi Yang 004; Xin Yu 002; Sophie Chiron; Lori A. Coburn; Keith T. Wilson; Joseph T. Roland; Bennett A. Landman; Yuankai Huo (Digital and Computational Pathology, 2022)

Alleviating tiling effect by random walk sliding window in high-resolution histological whole slide image synthesis. - Shunxing Bao; Ho Hin Lee; Qi Yang 004; Lucas Walker Remedios; Ruining Deng; Can Cui 006; Leon Yichen Cai; Kaiwen Xu; Xin Yu 010; Sophie Chiron; Yike Li; Nathan Heath Patterson; et al. (MIDL, 2023)

Topological-preserving membrane skeleton segmentation in multiplex immunofluorescence imaging. - Shunxing Bao; Can Cui 006; Jia Li 027; Yucheng Tang; Ho Hin Lee; Ruining Deng; Lucas W. Remedios; Xin Yu 010; Qi Yang 004; Sophie Chiron; Nathan Heath Patterson; Ken S. Lau; et al. (Digital and Computational Pathology, 2023)

Influence of cell-type ratio on spatially resolved single-cell transcriptomes using the Tangram algorithm: based on implementation on single-cell and MxIF data. - Can Cui 006; Shunxing Bao; Jia Li 027; Ruining Deng; Lucas W. Remedios; Zuhayr Asad; Sophie Chiron; Ken S. Lau; Yaohong Wang; Lori A. Coburn; Keith T. Wilson; Joseph T. Roland; et al. (Digital and Computational Pathology, 2023)

Predicting Crohn's disease severity in the colon using mixed cell nucleus density from pseudo labels. - Lucas W. Remedios; Shunxing Bao; Cailey I. Kerley; Leon Y. Cai; François Rheault; Ruining Deng; Can Cui 006; Sophie Chiron; Ken S. Lau; Joseph T. Roland; Mary K. Washington; Lori A. Coburn; et al. (Digital and Computational Pathology, 2023)

Cross-scale multi-instance learning for pathological image diagnosis. - Ruining Deng; Can Cui 006; Lucas W. Remedios; Shunxing Bao; R. Michael Womick; Sophie Chiron; Jia Li 027; Joseph T. Roland; Ken S. Lau; Qi Liu 024; Keith T. Wilson; Yaohong Wang; et al. (Medical Image Anal., 2024)