Comparing Probabilistic and Logic Programming Approaches to Predict the Effects of Enzymes in a Neurodegenerative Disease Model. - Sophie Le Bars; Jérémie Bourdon; Carito Guziolowski (CMSB, 2020)

Hybrid, logical and linear modelling to predict in silico the effect of perturbations on metabolism. (Modélisation hybride, logique et linéaire pour prédire in silico l'effet des perturbations sur le métabolisme). - Sophie Le Bars (2022)

Predicting weighted unobserved nodes in a regulatory network using answer set programming. - Sophie Le Bars; Mathieu Bolteau; Jérémie Bourdon; Carito Guziolowski (BMC Bioinform., 2023)