Evaluating bacterial gene-finding HMM structures as probabilistic logic programs. - Søren Mørk; Ian H. Holmes (Bioinform., 2012)

A Probabilistic Genome-Wide Gene Reading Frame Sequence Model. - Christian Theil Have; Søren Mørk (IWBBIO, 2014)

Protein-driven inference of miRNA-disease associations. - Søren Mørk; Sune Pletscher-Frankild; Albert Pallejà Caro; Jan Gorodkin; Lars Juhl Jensen (Bioinform., 2014)