Discovering Regulated Networks During HIV-1 Latency and Reactivation. - Sourav Bandyopadhyay; Ryan M. Kelley; Trey Ideker (Pacific Symposium on Biocomputing, 2006)

Functional Maps of Protein Complexes from Quantitative Genetic Interaction Data. - Sourav Bandyopadhyay; Ryan M. Kelley; Nevan J. Krogan; Trey Ideker (PLoS Comput. Biol., 2008)

Trans-channel fluorescence learning improves high-content screening for Alzheimer's disease therapeutics. - Daniel R. Wong; Jay Conrad; Noah R. Johnson; Jacob Ayers; Annelies Laeremans; Joanne C. Lee; Jisoo Lee; Stanley B. Prusiner; Sourav Bandyopadhyay; Atul J. Butte; Nick A. Paras; Michael J. Keiser (Nat. Mach. Intell., 2022)

Computational Drug Repurposing Using Power Graph Analysis of Integrated Drug-Target-Disease Network. - P. H. Nishamol; Sourav Bandyopadhyay; G. Gopakumar 001 (IEEE Access, 2023)