MIAMI: mutual information-based analysis of multiplex imaging data. - Souvik Seal; Debashis Ghosh (Bioinform., 2022)

FunSpace: A functional and spatial analytic approach to cell imaging data using entropy measures. - Thao Vu; Souvik Seal; Tusharkanti Ghosh; Mansooreh Ahmadian; Julia Wrobel; Debashis Ghosh (PLoS Comput. Biol., 2023)

RCFGL: Rapid Condition adaptive Fused Graphical Lasso and application to modeling brain region co-expression networks. - Souvik Seal; Qunhua Li; Elle Butler Basner; Laura M. Saba; Katerina J. Kechris (PLoS Comput. Biol., 2023)