DBSI server: DNA binding site identifier. - Shravan Sukumar; Xiaolei Zhu 001; Spencer S. Ericksen; Julie C. Mitchell (Bioinform., 2016)

Machine Learning Consensus Scoring Improves Performance Across Targets in Structure-Based Virtual Screening. - Spencer S. Ericksen; Haozhen Wu; Huikun Zhang; Lauren A. Michael; Michael A. Newton; F. Michael Hoffmann; Scott A. Wildman (J. Chem. Inf. Model., 2017)

Practical Model Selection for Prospective Virtual Screening. - Shengchao Liu; Moayad Alnammi; Spencer S. Ericksen; Andrew F. Voter; Gene E. Ananiev; James L. Keck; F. Michael Hoffmann; Scott A. Wildman; Anthony Gitter (J. Chem. Inf. Model., 2019)

Predicting kinase inhibitors using bioactivity matrix derived informer sets. - Huikun Zhang; Spencer S. Ericksen; Ching-pei Lee; Gene E. Ananiev; Nathan Wlodarchak; Peng Yu; Julie C. Mitchell; Anthony Gitter; Stephen J. Wright 001; F. Michael Hoffmann; Scott A. Wildman; Michael A. Newton (PLoS Comput. Biol., 2019)

Evaluating Scalable Supervised Learning for Synthesize-on-Demand Chemical Libraries. - Moayad Alnammi; Shengchao Liu; Spencer S. Ericksen; Gene E. Ananiev; Andrew F. Voter; Song Guo; James L. Keck; F. Michael Hoffmann; Scott A. Wildman; Anthony Gitter (J. Chem. Inf. Model., 2023)

Data mining of PubChem bioassay records reveals diverse OXPHOS inhibitory chemotypes as potential therapeutic agents against ovarian cancer. - Sejal Sharma; Liping Feng; Nicha Boonpattrawong; Arvinder Kapur; Lisa Barroilhet; Manish S. Patankar; Spencer S. Ericksen (J. Cheminformatics, 2024)

Chemical Language Model Linker: Blending Text and Molecules with Modular Adapters. - Yifan Deng; Spencer S. Ericksen; Anthony Gitter (J. Chem. Inf. Model., 2025)

Assay2Mol: large language model-based drug design using BioAssay context. - Yifan Deng; Spencer S. Ericksen; Anthony Gitter (CoRR, 2025)