The Database of Quantitative Cellular Signaling: management and analysis of chemical kinetic models of signaling networks. - Sudhir Sivakumaran; Sridhar Hariharaputran; Jyoti Mishra; Upinder S. Bhalla (Bioinform., 2003)

VINEdb: a data warehouse for integration and interactive exploration of life science data. - Sridhar Hariharaputran; Thoralf Töpel; Björn Brockschmidt; Ralf Hofestädt (J. Integr. Bioinform., 2007)

Petri net models for the semi-automatic construction of large scale biological networks. - Ming Chen 005; Sridhar Hariharaputran; Ralf Hofestädt; Benjamin Kormeier; Sarah Spangardt (Nat. Comput., 2011)

SInCRe - structural interactome computational resource for Mycobacterium tuberculosis. - Rahul Metri; Sridhar Hariharaputran; Gayatri Ramakrishnan; Praveen Anand; Upadhyayula S. Raghavender; Bernardo Ochoa-Montaño; Alicia P. Higueruelo; Ramanathan Sowdhamini; Nagasuma R. Chandra; Tom L. Blundell; Narayanaswamy Srinivasan (Database J. Biol. Databases Curation, 2015)

PASS2 database for the structure-based sequence alignment of distantly related SCOP domain superfamilies: update to version 5 and added features. - Arumugam Gandhimathi; Pritha Ghosh; Sridhar Hariharaputran; Oommen K. Mathew; Ramanathan Sowdhamini (Nucleic Acids Res., 2016)